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Line 1... |
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/*
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The basic EPS routines, Create, View, etc. are here.
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*/
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#include "src/eps/epsimpl.h" /*I "slepceps.h" I*/
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PetscTruth EPSRegisterAllCalled = PETSC_FALSE;
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PetscFList EPSList = 0;
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#undef __FUNCT__
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#define __FUNCT__ "EPSView"
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/*@C
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EPSView - Prints the EPS data structure.
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Collective on EPS
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Input Parameters:
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+ eps - the eigenproblem solver context
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- viewer - optional visualization context
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Options Database Key:
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. -eps_view - Calls EPSView() at end of EPSSolve()
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Note:
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The available visualization contexts include
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+ PETSC_VIEWER_STDOUT_SELF - standard output (default)
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- PETSC_VIEWER_STDOUT_WORLD - synchronized standard
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output where only the first processor opens
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the file. All other processors send their
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data to the first processor to print.
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The user can open an alternative visualization context with
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PetscViewerASCIIOpen() - output to a specified file.
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Level: beginner
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.seealso: STView(), PetscViewerASCIIOpen()
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@*/
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PetscErrorCode EPSView(EPS eps,PetscViewer viewer)
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{
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PetscErrorCode ierr;
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char *type, *which;
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PetscTruth isascii;
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PetscFunctionBegin;
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PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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if (!viewer) viewer = PETSC_VIEWER_STDOUT_(eps->comm);
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PetscValidHeaderSpecific(viewer,PETSC_VIEWER_COOKIE,2);
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PetscCheckSameComm(eps,1,viewer,2);
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#if defined(PETSC_USE_COMPLEX)
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#define HERM "hermitian"
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#else
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#define HERM "symmetric"
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#endif
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ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
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if (isascii) {
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ierr = PetscViewerASCIIPrintf(viewer,"EPS Object:\n");CHKERRQ(ierr);
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switch (eps->problem_type) {
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case EPS_HEP: type = HERM " eigenvalue problem"; break;
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case EPS_GHEP: type = "generalized " HERM " eigenvalue problem"; break;
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case EPS_NHEP: type = "non-" HERM " eigenvalue problem"; break;
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case EPS_GNHEP: type = "generalized non-" HERM " eigenvalue problem"; break;
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case 0: type = "not yet set"; break;
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default: SETERRQ(1,"Wrong value of eps->problem_type");
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}
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ierr = PetscViewerASCIIPrintf(viewer," problem type: %s\n",type);CHKERRQ(ierr);
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ierr = EPSGetType(eps,&type);CHKERRQ(ierr);
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if (type) {
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ierr = PetscViewerASCIIPrintf(viewer," method: %s\n",type);CHKERRQ(ierr);
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} else {
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ierr = PetscViewerASCIIPrintf(viewer," method: not yet set\n");CHKERRQ(ierr);
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}
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if (eps->ops->view) {
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ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
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ierr = (*eps->ops->view)(eps,viewer);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
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}
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switch (eps->which) {
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case EPS_LARGEST_MAGNITUDE: which = "largest eigenvalues in magnitude"; break;
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case EPS_SMALLEST_MAGNITUDE: which = "smallest eigenvalues in magnitude"; break;
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case EPS_LARGEST_REAL: which = "largest real parts"; break;
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case EPS_SMALLEST_REAL: which = "smallest real parts"; break;
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case EPS_LARGEST_IMAGINARY: which = "largest imaginary parts"; break;
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case EPS_SMALLEST_IMAGINARY: which = "smallest imaginary parts"; break;
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default: SETERRQ(1,"Wrong value of eps->which");
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}
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ierr = PetscViewerASCIIPrintf(viewer," selected portion of the spectrum: %s\n",which);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer," number of eigenvalues (nev): %d\n",eps->nev);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer," number of basis vectors (ncv): %d\n",eps->ncv);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer," maximum number of iterations: %d\n", eps->max_it);
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ierr = PetscViewerASCIIPrintf(viewer," tolerance: %g\n",eps->tol);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer," orthogonalization method: ");CHKERRQ(ierr);
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switch (eps->orthog_type) {
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case EPS_MGS_ORTH:
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ierr = PetscViewerASCIIPrintf(viewer,"modified Gram-Schmidt\n");CHKERRQ(ierr);
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break;
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case EPS_CGS_ORTH:
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ierr = PetscViewerASCIIPrintf(viewer,"classical Gram-Schmidt\n");CHKERRQ(ierr);
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break;
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default: SETERRQ(1,"Wrong value of eps->orth_type");
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}
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ierr = PetscViewerASCIIPrintf(viewer," orthogonalization refinement: ");CHKERRQ(ierr);
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switch (eps->orthog_ref) {
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case EPS_ORTH_REFINE_NEVER:
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ierr = PetscViewerASCIIPrintf(viewer,"never\n");CHKERRQ(ierr);
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break;
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case EPS_ORTH_REFINE_IFNEEDED:
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ierr = PetscViewerASCIIPrintf(viewer,"if needed (eta: %f)\n",eps->orthog_eta);CHKERRQ(ierr);
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break;
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case EPS_ORTH_REFINE_ALWAYS:
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ierr = PetscViewerASCIIPrintf(viewer,"always\n");CHKERRQ(ierr);
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break;
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default: SETERRQ(1,"Wrong value of eps->orth_ref");
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}
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ierr = PetscViewerASCIIPrintf(viewer," dimension of user-provided deflation space: %d\n",eps->nds);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
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ierr = STView(eps->OP,viewer); CHKERRQ(ierr);
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ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
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} else {
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if (eps->ops->view) {
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ierr = (*eps->ops->view)(eps,viewer);CHKERRQ(ierr);
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}
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ierr = STView(eps->OP,viewer); CHKERRQ(ierr);
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSPublish_Petsc"
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static PetscErrorCode EPSPublish_Petsc(PetscObject object)
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{
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PetscFunctionBegin;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSCreate"
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/*@C
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EPSCreate - Creates the default EPS context.
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Collective on MPI_Comm
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Input Parameter:
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. comm - MPI communicator
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Output Parameter:
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. eps - location to put the EPS context
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Note:
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The default EPS type is EPSARNOLDI
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Level: beginner
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.seealso: EPSSetUp(), EPSSolve(), EPSDestroy(), EPS
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@*/
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PetscErrorCode EPSCreate(MPI_Comm comm,EPS *outeps)
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{
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PetscErrorCode ierr;
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EPS eps;
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PetscFunctionBegin;
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PetscValidPointer(outeps,2);
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*outeps = 0;
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#ifndef PETSC_USE_DYNAMIC_LIBRARIES
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ierr = EPSRegisterAll(PETSC_NULL);CHKERRQ(ierr);
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#endif
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PetscHeaderCreate(eps,_p_EPS,struct _EPSOps,EPS_COOKIE,-1,"EPS",comm,EPSDestroy,EPSView);
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PetscLogObjectCreate(eps);
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*outeps = eps;
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eps->bops->publish = EPSPublish_Petsc;
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ierr = PetscMemzero(eps->ops,sizeof(struct _EPSOps));CHKERRQ(ierr);
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eps->type = -1;
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eps->max_it = 0;
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eps->nev = 1;
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eps->ncv = 0;
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eps->allocated_ncv = 0;
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eps->nds = 0;
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eps->tol = 0.0;
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eps->which = EPS_LARGEST_MAGNITUDE;
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eps->evecsavailable = PETSC_FALSE;
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eps->problem_type = (EPSProblemType)0;
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eps->vec_initial = 0;
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eps->vec_initial_set = PETSC_FALSE;
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eps->V = 0;
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eps->AV = 0;
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eps->T = 0;
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eps->DS = 0;
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eps->ds_ortho = PETSC_TRUE;
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eps->eigr = 0;
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eps->eigi = 0;
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eps->errest = 0;
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eps->OP = 0;
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eps->data = 0;
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eps->nconv = 0;
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eps->its = 0;
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eps->perm = PETSC_NULL;
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eps->nwork = 0;
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eps->work = 0;
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eps->isgeneralized = PETSC_FALSE;
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eps->ishermitian = PETSC_FALSE;
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eps->setupcalled = 0;
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eps->reason = EPS_CONVERGED_ITERATING;
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eps->numbermonitors = 0;
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eps->orthog_type = EPS_CGS_ORTH;
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eps->orthog_ref = EPS_ORTH_REFINE_IFNEEDED;
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eps->orthog_eta = 0.7071;
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ierr = STCreate(comm,&eps->OP); CHKERRQ(ierr);
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PetscLogObjectParent(eps,eps->OP);
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ierr = PetscPublishAll(eps);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSSetType"
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/*@C
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EPSSetType - Selects the particular solver to be used in the EPS object.
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Collective on EPS
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Input Parameters:
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+ eps - the eigensolver context
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- type - a known method
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Options Database Key:
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. -eps_type <method> - Sets the method; use -help for a list
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of available methods
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Notes:
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See "slepc/include/slepceps.h" for available methods.
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Normally, it is best to use the EPSSetFromOptions() command and
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then set the EPS type from the options database rather than by using
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this routine. Using the options database provides the user with
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maximum flexibility in evaluating the different available methods.
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The EPSSetType() routine is provided for those situations where it
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is necessary to set the iterative solver independently of the command
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line or options database.
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Level: intermediate
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.seealso: STSetType(), EPSType
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@*/
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PetscErrorCode EPSSetType(EPS eps,EPSType type)
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{
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PetscErrorCode ierr,(*r)(EPS);
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PetscTruth match;
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PetscFunctionBegin;
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PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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PetscValidCharPointer(type,2);
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ierr = PetscTypeCompare((PetscObject)eps,type,&match);CHKERRQ(ierr);
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if (match) PetscFunctionReturn(0);
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if (eps->data) {
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/* destroy the old private EPS context */
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ierr = (*eps->ops->destroy)(eps); CHKERRQ(ierr);
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eps->data = 0;
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}
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/* Get the function pointers for the iterative method requested */
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if (!EPSRegisterAllCalled) {ierr = EPSRegisterAll(PETSC_NULL); CHKERRQ(ierr);}
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ierr = PetscFListFind(eps->comm,EPSList,type,(void (**)(void)) &r);CHKERRQ(ierr);
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if (!r) SETERRQ1(1,"Unknown EPS type given: %s",type);
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eps->setupcalled = 0;
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ierr = PetscMemzero(eps->ops,sizeof(struct _EPSOps));CHKERRQ(ierr);
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ierr = (*r)(eps); CHKERRQ(ierr);
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ierr = PetscObjectChangeTypeName((PetscObject)eps,type);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSRegisterDestroy"
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/*@C
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EPSRegisterDestroy - Frees the list of EPS methods that were
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registered by EPSRegisterDynamic().
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Not Collective
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Level: advanced
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.seealso: EPSRegisterDynamic(), EPSRegisterAll()
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@*/
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PetscErrorCode EPSRegisterDestroy(void)
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{
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PetscErrorCode ierr;
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PetscFunctionBegin;
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if (EPSList) {
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ierr = PetscFListDestroy(&EPSList);CHKERRQ(ierr);
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EPSList = 0;
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}
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EPSRegisterAllCalled = PETSC_FALSE;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSGetType"
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/*@C
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EPSGetType - Gets the EPS type as a string from the EPS object.
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Not Collective
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Input Parameter:
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. eps - the eigensolver context
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Output Parameter:
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. name - name of EPS method
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Level: intermediate
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.seealso: EPSSetType()
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@*/
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PetscErrorCode EPSGetType(EPS eps,EPSType *type)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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*type = eps->type_name;
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PetscFunctionReturn(0);
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}
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/*MC
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EPSRegisterDynamic - Adds a method to the eigenproblem solver package.
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Synopsis:
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EPSRegisterDynamic(char *name_solver,char *path,char *name_create,int (*routine_create)(EPS))
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Not Collective
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Input Parameters:
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+ name_solver - name of a new user-defined solver
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. path - path (either absolute or relative) the library containing this solver
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. name_create - name of routine to create the solver context
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- routine_create - routine to create the solver context
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Notes:
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EPSRegisterDynamic() may be called multiple times to add several user-defined solvers.
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If dynamic libraries are used, then the fourth input argument (routine_create)
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is ignored.
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Sample usage:
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.vb
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EPSRegisterDynamic("my_solver",/home/username/my_lib/lib/libO/solaris/mylib.a,
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"MySolverCreate",MySolverCreate);
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.ve
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Then, your solver can be chosen with the procedural interface via
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$ EPSSetType(eps,"my_solver")
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or at runtime via the option
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$ -eps_type my_solver
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Level: advanced
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Environmental variables such as ${PETSC_ARCH}, ${SLEPC_DIR}, ${BOPT},
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and others of the form ${any_environmental_variable} occuring in pathname will be
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replaced with appropriate values.
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.seealso: EPSRegisterAll(), EPSRegisterDestroy()
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M*/
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#undef __FUNCT__
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#define __FUNCT__ "EPSRegister"
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PetscErrorCode EPSRegister(char *sname,char *path,char *name,int (*function)(EPS))
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{
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|
PetscErrorCode ierr;
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char fullname[256];
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PetscFunctionBegin;
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ierr = PetscFListConcat(path,name,fullname);CHKERRQ(ierr);
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ierr = PetscFListAdd(&EPSList,sname,fullname,(void (*)(void))function);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
|
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#undef __FUNCT__
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#define __FUNCT__ "EPSDestroy"
|
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/*@
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|
EPSDestroy - Destroys the EPS context.
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Collective on EPS
|
|
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Input Parameter:
|
|
. eps - eigensolver context obtained from EPSCreate()
|
|
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|
Level: beginner
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|
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|
.seealso: EPSCreate(), EPSSetUp(), EPSSolve()
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|
@*/
|
|
PetscErrorCode EPSDestroy(EPS eps)
|
|
{
|
|
PetscErrorCode ierr;
|
|
|
|
PetscFunctionBegin;
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|
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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if (--eps->refct > 0) PetscFunctionReturn(0);
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|
/* if memory was published with AMS then destroy it */
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ierr = PetscObjectDepublish(eps);CHKERRQ(ierr);
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ierr = STDestroy(eps->OP);CHKERRQ(ierr);
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|
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if (eps->ops->destroy) {
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|
ierr = (*eps->ops->destroy)(eps); CHKERRQ(ierr);
|
|
}
|
|
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|
if (eps->T) {
|
|
ierr = PetscFree(eps->T);CHKERRQ(ierr);
|
|
}
|
|
|
|
if (eps->perm) {
|
|
ierr = PetscFree(eps->perm);CHKERRQ(ierr);
|
|
}
|
|
|
|
if (eps->vec_initial) {
|
|
ierr = VecDestroy(eps->vec_initial);CHKERRQ(ierr);
|
|
}
|
|
|
|
if (eps->nds > 0) {
|
|
ierr = VecDestroyVecs(eps->DS, eps->nds);
|
|
}
|
|
|
|
if (eps->DSV) {
|
|
ierr = PetscFree(eps->DSV);CHKERRQ(ierr);
|
|
}
|
|
|
|
PetscLogObjectDestroy(eps);
|
|
PetscHeaderDestroy(eps);
|
|
PetscFunctionReturn(0);
|
|
}
|
|
|
|
#undef __FUNCT__
|
|
#define __FUNCT__ "EPSSetST"
|
|
/*@
|
|
EPSSetST - Associates a spectral transformation object to the
|
|
eigensolver.
|
|
|
|
Collective on EPS
|
|
|
|
Input Parameters:
|
|
+ eps - eigensolver context obtained from EPSCreate()
|
|
- st - the spectral transformation object
|
|
|
|
Note:
|
|
Use EPSGetST() to retrieve the spectral transformation context (for example,
|
|
to free it at the end of the computations).
|
|
|
|
Level: advanced
|
|
|
|
.seealso: EPSGetST()
|
|
@*/
|
|
PetscErrorCode EPSSetST(EPS eps,ST st)
|
|
{
|
|
PetscErrorCode ierr;
|
|
|
|
PetscFunctionBegin;
|
|
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
PetscValidHeaderSpecific(st,ST_COOKIE,2);
|
|
PetscCheckSameComm(eps,1,st,2);
|
|
ierr = STDestroy(eps->OP); CHKERRQ(ierr);
|
|
eps->OP = st;
|
|
PetscObjectReference((PetscObject)eps->OP);
|
|
PetscFunctionReturn(0);
|
|
}
|
|
|
|
#undef __FUNCT__
|
|
#define __FUNCT__ "EPSGetST"
|
|
/*@
|
|
EPSGetST - Obtain the spectral transformation (ST) object associated
|
|
to the eigensolver object.
|
|
|
|
Not Collective
|
|
|
|
Input Parameters:
|
|
. eps - eigensolver context obtained from EPSCreate()
|
|
|
|
Output Parameter:
|
|
. st - spectral transformation context
|
|
|
|
Level: beginner
|
|
|
|
.seealso: EPSSetST()
|
|
@*/
|
|
PetscErrorCode EPSGetST(EPS eps, ST *st)
|
|
{
|
|
PetscFunctionBegin;
|
|
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
*st = eps->OP;
|
|
PetscFunctionReturn(0);
|
|
}
|
|
|
|
#undef __FUNCT__
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#define __FUNCT__ "EPSIsGeneralized"
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/*@
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EPSIsGeneralized - Ask if the EPS object corresponds to a generalized
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eigenvalue problem.
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Not collective
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Input Parameter:
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. eps - the eigenproblem solver context
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Output Parameter:
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. is - the answer
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Level: intermediate
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@*/
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PetscErrorCode EPSIsGeneralized(EPS eps,PetscTruth* is)
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{
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PetscErrorCode ierr;
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Mat B;
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PetscFunctionBegin;
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PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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ierr = STGetOperators(eps->OP,PETSC_NULL,&B);CHKERRQ(ierr);
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if( B ) *is = PETSC_TRUE;
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else *is = PETSC_FALSE;
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if( eps->setupcalled ) {
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if( eps->isgeneralized != *is ) {
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SETERRQ(0,"Warning: Inconsistent EPS state");
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}
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "EPSIsHermitian"
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/*@
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EPSIsHermitian - Ask if the EPS object corresponds to a Hermitian
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eigenvalue problem.
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Not collective
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Input Parameter:
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. eps - the eigenproblem solver context
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Output Parameter:
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. is - the answer
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Level: intermediate
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@*/
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PetscErrorCode EPSIsHermitian(EPS eps,PetscTruth* is)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
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if( eps->ishermitian ) *is = PETSC_TRUE;
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else *is = PETSC_FALSE;
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PetscFunctionReturn(0);
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}
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