| 1272 |
slepc |
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/*
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SVD routines for setting solver options.
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*/
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#include "src/svd/svdimpl.h" /*I "slepcsvd.h" I*/
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetTransposeMode"
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/*@C
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SVDSetTransposeMode - Sets how to handle the transpose of the matrix
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associated with the singular value problem.
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Collective on SVD and Mat
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Input Parameters:
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+ svd - the singular value solver context
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- mode - how to compute the transpose, one of SVD_TRANSPOSE_EXPLICIT
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or SVD_TRANSPOSE_MATMULT (see notes below)
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Options Database Key:
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. -svd_transpose_mode <mode> - Indicates the mode flag, where <mode>
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is one of 'explicit' or 'matmult'.
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Notes:
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In the SVD_TRANSPOSE_EXPLICIT mode, the transpose of the matrix is
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explicitly built.
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The option SVD_TRANSPOSE_MATMULT does not build the transpose, but
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handles it implicitly via MatMultTranspose() operations. This is
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likely to be more inefficient than SVD_TRANSPOSE_EXPLICIT, both in
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sequential and in parallel, but requires less storage.
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The default is SVD_TRANSPOSE_EXPLICIT if the matrix has defined the
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MatTranspose operation, and SVD_TRANSPOSE_MATMULT otherwise.
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Level: advanced
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.seealso: SVDGetTransposeMode(), SVDSolve(), SVDSetOperator(), SVDGetOperator()
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@*/
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PetscErrorCode SVDSetTransposeMode(SVD svd,SVDTransposeMode mode)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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switch (mode) {
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slepc |
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case PETSC_DEFAULT:
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mode = PETSC_DECIDE;
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slepc |
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case SVD_TRANSPOSE_EXPLICIT:
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slepc |
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case SVD_TRANSPOSE_IMPLICIT:
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case PETSC_DECIDE:
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slepc |
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svd->transmode = mode;
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svd->setupcalled = 0;
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break;
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default:
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SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid transpose mode");
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDGetTransposeMode"
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/*@
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SVDGetTransposeMode - Gets the mode use to compute the transpose
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of the matrix associated with the singular value problem.
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Not collective
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Input Parameter:
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+ svd - the singular value solver context
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Output paramter:
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+ mode - how to compute the transpose, one of SVD_TRANSPOSE_EXPLICIT
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or SVD_TRANSPOSE_MATMULT
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Level: advanced
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.seealso: SVDSetTransposeMode(), SVDSolve(), SVDSetOperator(), SVDGetOperator()
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@*/
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PetscErrorCode SVDGetTransposeMode(SVD svd,SVDTransposeMode *mode)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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PetscValidPointer(mode,2);
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*mode = svd->transmode;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetTolerances"
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/*@
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SVDSetTolerances - Sets the tolerance and maximum
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iteration count used by the default SVD convergence testers.
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Collective on SVD
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Input Parameters:
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+ svd - the singluar value solver context
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. tol - the convergence tolerance
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- maxits - maximum number of iterations to use
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Options Database Keys:
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+ -svd_tol <tol> - Sets the convergence tolerance
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- -svd_max_it <maxits> - Sets the maximum number of iterations allowed
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slepc |
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(use PETSC_DECIDE to compute an educated guess based on basis and matrix sizes)
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slepc |
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Notes:
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Use PETSC_IGNORE to retain the previous value of any parameter.
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Level: intermediate
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.seealso: SVDGetTolerances()
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@*/
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PetscErrorCode SVDSetTolerances(SVD svd,PetscReal tol,int maxits)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (tol != PETSC_IGNORE) {
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slepc |
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if (tol == PETSC_DEFAULT) {
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tol = 1e-7;
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} else {
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if (tol < 0.0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Illegal value of tol. Must be > 0");
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svd->tol = tol;
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}
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slepc |
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}
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if (maxits != PETSC_IGNORE) {
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slepc |
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if (maxits == PETSC_DEFAULT || maxits == PETSC_DECIDE) {
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svd->max_it = PETSC_DECIDE;
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slepc |
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svd->setupcalled = 0;
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} else {
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slepc |
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if (maxits < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Illegal value of maxits. Must be > 0");
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slepc |
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svd->max_it = maxits;
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slepc |
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}
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDGetTolerances"
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/*@
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SVDGetTolerances - Gets the tolerance and maximum
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iteration count used by the default SVD convergence tests.
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Not Collective
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Input Parameter:
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. svd - the singular value solver context
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Output Parameters:
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+ tol - the convergence tolerance
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- maxits - maximum number of iterations
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Notes:
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The user can specify PETSC_NULL for any parameter that is not needed.
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Level: intermediate
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.seealso: SVDSetTolerances()
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@*/
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PetscErrorCode SVDGetTolerances(SVD svd,PetscReal *tol,int *maxits)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (tol) *tol = svd->tol;
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if (maxits) *maxits = svd->max_it;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetDimensions"
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/*@
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SVDSetDimensions - Sets the number of singular values to compute
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and the dimension of the subspace.
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Collective on SVD
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Input Parameters:
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+ svd - the singular solver context
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. nsv - number of singular values to compute
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- ncv - the maximum dimension of the subspace to be used by the solver
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Options Database Keys:
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+ -svd_nsv <nsv> - Sets the number of singular values
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- -svd_ncv <ncv> - Sets the dimension of the subspace
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Notes:
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Use PETSC_IGNORE to retain the previous value of any parameter.
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slepc |
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Use PETSC_DECIDE for ncv to assign a reasonably good value, which is
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dependent on the solution method and the number of singular values required.
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slepc |
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Level: intermediate
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.seealso: SVDGetDimensions()
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@*/
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PetscErrorCode SVDSetDimensions(SVD svd,int nsv,int ncv)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (nsv != PETSC_IGNORE) {
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if (nsv<1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Illegal value of nsv. Must be > 0");
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svd->nsv = nsv;
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}
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if (ncv != PETSC_IGNORE) {
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slepc |
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if (ncv == PETSC_DEFAULT || ncv == PETSC_DECIDE) {
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svd->ncv = PETSC_DECIDE;
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} else {
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if (ncv<1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Illegal value of ncv. Must be > 0");
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svd->ncv = ncv;
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}
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slepc |
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svd->setupcalled = 0;
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDGetDimensions"
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/*@
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SVDGetDimensions - Gets the number of singular values to compute
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and the dimension of the subspace.
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Not Collective
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Input Parameter:
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. svd - the singular value context
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Output Parameters:
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+ nsv - number of singular values to compute
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- ncv - the maximum dimension of the subspace to be used by the solver
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Notes:
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The user can specify PETSC_NULL for any parameter that is not needed.
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Level: intermediate
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.seealso: SVDSetDimensions()
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@*/
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PetscErrorCode SVDGetDimensions(SVD svd,int *nsv,int *ncv)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (nsv) *nsv = svd->nsv;
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if (ncv) *ncv = svd->ncv;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetWhichSingularTriplets"
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/*@
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SVDSetWhichSingularTriplets - Specifies which singular triplets are
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to be sought.
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Collective on SVD
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Input Parameter:
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. svd - singular value solver context obtained from SVDCreate()
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Output Parameter:
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. which - which singular triplets are to be sought
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Possible values:
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The parameter 'which' can have one of these values:
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+ SVD_LARGEST - largest singular values
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- SVD_SMALLEST - smallest singular values
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Options Database Keys:
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slepc |
266 |
+ -svd_largest - Sets largest singular values
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- -svd_smallest - Sets smallest singular values
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slepc |
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Level: intermediate
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.seealso: SVDGetWhichSingularTriplets()
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@*/
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PetscErrorCode SVDSetWhichSingularTriplets(SVD svd,SVDWhich which)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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switch (which) {
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case SVD_LARGEST:
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case SVD_SMALLEST:
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svd->which = which;
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break;
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default:
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SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid 'which' parameter");
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDGetWhichSingularTriplets"
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/*@C
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SVDGetWhichSingularTriplet - Returns which singular triplets are
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to be sought.
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Not Collective
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Input Parameter:
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. svd - singular value solver context obtained from SVDCreate()
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Output Parameter:
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. which - which singular triplets are to be sought
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Notes:
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See SVDSetWhichSingularTriplets() for possible values of which
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Level: intermediate
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.seealso: SVDSetWhichSingularTriplets()
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@*/
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PetscErrorCode SVDGetWhichSingularTriplets(SVD svd,SVDWhich *which)
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{
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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PetscValidPointer(which,2);
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*which = svd->which;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetFromOptions"
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/*@
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SVDSetFromOptions - Sets SVD options from the options database.
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This routine must be called before SVDSetUp() if the user is to be
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allowed to set the solver type.
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Collective on SVD
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Input Parameters:
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. svd - the singular value solver context
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329 |
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Notes:
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To see all options, run your program with the -help option.
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Level: beginner
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334 |
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.seealso:
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@*/
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337 |
PetscErrorCode SVDSetFromOptions(SVD svd)
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338 |
{
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339 |
PetscErrorCode ierr;
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slepc |
340 |
char type[256],monfilename[PETSC_MAX_PATH_LEN];
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| 1283 |
slepc |
341 |
PetscTruth flg;
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const char *mode_list[2] = { "explicit", "implicit" };
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| 1272 |
slepc |
343 |
PetscInt i,j;
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PetscReal r;
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slepc |
345 |
PetscViewer monviewer;
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slepc |
346 |
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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svd->setupcalled = 0;
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ierr = PetscOptionsBegin(svd->comm,svd->prefix,"Singular Value Solver (SVD) Options","SVD");CHKERRQ(ierr);
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ierr = PetscOptionsList("-svd_type","Singular Value Solver method","SVDSetType",SVDList,(char*)(svd->type_name?svd->type_name:SVDEIGENSOLVER),type,256,&flg);CHKERRQ(ierr);
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if (flg) {
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ierr = SVDSetType(svd,type);CHKERRQ(ierr);
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} else if (!svd->type_name) {
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ierr = SVDSetType(svd,SVDEIGENSOLVER);CHKERRQ(ierr);
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}
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|
359 |
ierr = PetscOptionsName("-svd_view","Print detailed information on solver used","SVDView",0);CHKERRQ(ierr);
|
|
|
360 |
|
| 1283 |
slepc |
361 |
ierr = PetscOptionsEList("-svd_transpose_mode","Transpose SVD mode","SVDSetTransposeMode",mode_list,2,svd->transmode == PETSC_DECIDE ? "decide" : mode_list[svd->transmode],&i,&flg);CHKERRQ(ierr);
|
| 1272 |
slepc |
362 |
if (flg) {
|
|
|
363 |
ierr = SVDSetTransposeMode(svd,(SVDTransposeMode)i);CHKERRQ(ierr);
|
|
|
364 |
}
|
|
|
365 |
|
|
|
366 |
r = i = PETSC_IGNORE;
|
| 1283 |
slepc |
367 |
ierr = PetscOptionsInt("-svd_max_it","Maximum number of iterations","SVDSetTolerances",svd->max_it,&i,PETSC_NULL);CHKERRQ(ierr);
|
|
|
368 |
ierr = PetscOptionsReal("-svd_tol","Tolerance","SVDSetTolerances",svd->tol,&r,PETSC_NULL);CHKERRQ(ierr);
|
|
|
369 |
ierr = SVDSetTolerances(svd,r,i);CHKERRQ(ierr);
|
| 1272 |
slepc |
370 |
|
|
|
371 |
i = j = PETSC_IGNORE;
|
| 1283 |
slepc |
372 |
ierr = PetscOptionsInt("-svd_nsv","Number of singular values to compute","SVDSetDimensions",svd->ncv,&i,PETSC_NULL);CHKERRQ(ierr);
|
|
|
373 |
ierr = PetscOptionsInt("-svd_ncv","Number of basis vectors","SVDSetDimensions",svd->ncv,&j,PETSC_NULL);CHKERRQ(ierr);
|
|
|
374 |
ierr = SVDSetDimensions(svd,i,j);CHKERRQ(ierr);
|
| 1272 |
slepc |
375 |
|
| 1277 |
slepc |
376 |
ierr = PetscOptionsTruthGroupBegin("-svd_largest","compute largest singular values","SVDSetWhichSingularTriplets",&flg);CHKERRQ(ierr);
|
|
|
377 |
if (flg) { ierr = SVDSetWhichSingularTriplets(svd,SVD_LARGEST);CHKERRQ(ierr); }
|
|
|
378 |
ierr = PetscOptionsTruthGroupEnd("-svd_smallest","compute smallest singular values","SVDSetWhichSingularTriplets",&flg);CHKERRQ(ierr);
|
|
|
379 |
if (flg) { ierr = SVDSetWhichSingularTriplets(svd,SVD_SMALLEST);CHKERRQ(ierr); }
|
|
|
380 |
|
| 1288 |
slepc |
381 |
ierr = PetscOptionsName("-svd_cancelmonitors","Remove any hardwired monitor routines","SVDClearMonitor",&flg);CHKERRQ(ierr);
|
|
|
382 |
if (flg) {
|
| 1291 |
slepc |
383 |
ierr = SVDClearMonitor(svd);CHKERRQ(ierr);
|
| 1288 |
slepc |
384 |
}
|
|
|
385 |
|
|
|
386 |
ierr = PetscOptionsString("-svd_monitor","Monitor approximate singular values and error estimates","SVDSetMonitor","stdout",monfilename,PETSC_MAX_PATH_LEN,&flg);CHKERRQ(ierr);
|
|
|
387 |
if (flg) {
|
|
|
388 |
ierr = PetscViewerASCIIOpen(svd->comm,monfilename,&monviewer);CHKERRQ(ierr);
|
|
|
389 |
ierr = SVDSetMonitor(svd,SVDDefaultMonitor,monviewer,(PetscErrorCode (*)(void*))PetscViewerDestroy);CHKERRQ(ierr);
|
|
|
390 |
}
|
|
|
391 |
ierr = PetscOptionsName("-svd_xmonitor","Monitor error estimates graphically","SVDSetMonitor",&flg);CHKERRQ(ierr);
|
|
|
392 |
if (flg) {
|
|
|
393 |
ierr = SVDSetMonitor(svd,SVDLGMonitor,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
|
|
|
394 |
}
|
|
|
395 |
|
| 1272 |
slepc |
396 |
ierr = PetscOptionsEnd();CHKERRQ(ierr);
|
| 1302 |
slepc |
397 |
ierr = IPSetFromOptions(svd->ip);CHKERRQ(ierr);
|
| 1272 |
slepc |
398 |
if (svd->ops->setfromoptions) {
|
|
|
399 |
ierr = (*svd->ops->setfromoptions)(svd);CHKERRQ(ierr);
|
|
|
400 |
}
|
|
|
401 |
PetscFunctionReturn(0);
|
|
|
402 |
}
|