| 1249 |
slepc |
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/*
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The basic SVD routines, Create, View, etc. are here.
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*/
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#include "src/svd/svdimpl.h" /*I "slepcsvd.h" I*/
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PetscFList SVDList = 0;
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PetscCookie SVD_COOKIE = 0;
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PetscEvent SVD_SetUp = 0, SVD_Solve = 0;
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#undef __FUNCT__
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#define __FUNCT__ "SVDInitializePackage"
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/*@C
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SVDInitializePackage - This function initializes everything in the SVD package. It is called
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from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to SVDCreate()
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when using static libraries.
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Input Parameter:
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path - The dynamic library path, or PETSC_NULL
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Level: developer
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.seealso: SlepcInitialize()
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@*/
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PetscErrorCode SVDInitializePackage(char *path)
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{
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static PetscTruth initialized = PETSC_FALSE;
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char logList[256];
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char *className;
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PetscTruth opt;
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PetscErrorCode ierr;
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PetscFunctionBegin;
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if (initialized) PetscFunctionReturn(0);
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initialized = PETSC_TRUE;
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/* Register Classes */
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ierr = PetscLogClassRegister(&SVD_COOKIE,"Singular Value Solver");CHKERRQ(ierr);
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/* Register Constructors */
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ierr = SVDRegisterAll(path);CHKERRQ(ierr);
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/* Register Events */
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ierr = PetscLogEventRegister(&SVD_SetUp,"SVDSetUp",SVD_COOKIE);CHKERRQ(ierr);
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ierr = PetscLogEventRegister(&SVD_Solve,"SVDSolve",SVD_COOKIE);CHKERRQ(ierr);
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/* Process info exclusions */
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ierr = PetscOptionsGetString(PETSC_NULL, "-log_info_exclude", logList, 256, &opt);CHKERRQ(ierr);
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if (opt) {
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ierr = PetscStrstr(logList, "svd", &className);CHKERRQ(ierr);
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if (className) {
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ierr = PetscInfoDeactivateClass(SVD_COOKIE);CHKERRQ(ierr);
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}
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}
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/* Process summary exclusions */
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ierr = PetscOptionsGetString(PETSC_NULL, "-log_summary_exclude", logList, 256, &opt);CHKERRQ(ierr);
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if (opt) {
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ierr = PetscStrstr(logList, "svd", &className);CHKERRQ(ierr);
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if (className) {
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ierr = PetscLogEventDeactivateClass(SVD_COOKIE);CHKERRQ(ierr);
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}
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDView"
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/*@C
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SVDView - Prints the SVD data structure.
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Collective on SVD
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Input Parameters:
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+ svd - the eigenproblem solver context
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- viewer - optional visualization context
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Options Database Key:
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. -svd_view - Calls SVDView() at end of SVDSolve()
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Note:
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The available visualization contexts include
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+ PETSC_VIEWER_STDOUT_SELF - standard output (default)
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- PETSC_VIEWER_STDOUT_WORLD - synchronized standard
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output where only the first processor opens
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the file. All other processors send their
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data to the first processor to print.
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The user can open an alternative visualization context with
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PetscViewerASCIIOpen() - output to a specified file.
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Level: beginner
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.seealso: STView(), PetscViewerASCIIOpen()
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@*/
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PetscErrorCode SVDView(SVD svd,PetscViewer viewer)
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{
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PetscErrorCode ierr;
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const char *type;
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PetscTruth isascii;
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slepc |
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const char *mode_list[3] = { "default" , "explicit", "user" };
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slepc |
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (!viewer) viewer = PETSC_VIEWER_STDOUT_(svd->comm);
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PetscValidHeaderSpecific(viewer,PETSC_VIEWER_COOKIE,2);
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PetscCheckSameComm(svd,1,viewer,2);
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ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
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if (isascii) {
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ierr = PetscViewerASCIIPrintf(viewer,"SVD Object:\n");CHKERRQ(ierr);
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ierr = SVDGetType(svd,&type);CHKERRQ(ierr);
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if (type) {
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slepc |
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ierr = PetscViewerASCIIPrintf(viewer," method: %s\n",type);CHKERRQ(ierr);
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slepc |
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} else {
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ierr = PetscViewerASCIIPrintf(viewer," method: not yet set\n");CHKERRQ(ierr);
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}
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slepc |
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ierr = PetscViewerASCIIPrintf(viewer," transpose mode: %s\n",mode_list[svd->transmode]);CHKERRQ(ierr);
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slepc |
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if (svd->ops->view) {
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ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
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ierr = (*svd->ops->view)(svd,viewer);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
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}
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} else {
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if (svd->ops->view) {
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ierr = (*svd->ops->view)(svd,viewer);CHKERRQ(ierr);
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}
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDPublish_Petsc"
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static PetscErrorCode SVDPublish_Petsc(PetscObject object)
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{
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PetscFunctionBegin;
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDCreate"
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/*@C
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SVDCreate - Creates the default SVD context.
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Collective on MPI_Comm
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Input Parameter:
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. comm - MPI communicator
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Output Parameter:
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. svd - location to put the SVD context
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Note:
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The default SVD type is SVDEIGENSOLVER
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Level: beginner
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.seealso: SVDSetUp(), SVDSolve(), SVDDestroy(), SVD
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@*/
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PetscErrorCode SVDCreate(MPI_Comm comm,SVD *outsvd)
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{
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PetscErrorCode ierr;
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SVD svd;
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PetscFunctionBegin;
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PetscValidPointer(outsvd,2);
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PetscHeaderCreate(svd,_p_SVD,struct _SVDOps,SVD_COOKIE,-1,"SVD",comm,SVDDestroy,SVDView);
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PetscLogObjectCreate(svd);
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*outsvd = svd;
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svd->bops->publish = SVDPublish_Petsc;
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ierr = PetscMemzero(svd->ops,sizeof(struct _SVDOps));CHKERRQ(ierr);
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svd->type_name = PETSC_NULL;
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svd->A = PETSC_NULL;
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slepc |
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svd->AT = PETSC_NULL;
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slepc |
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svd->transmode = SVD_TRANSPOSE_EXPLICIT;
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slepc |
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svd->sigma = PETSC_NULL;
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slepc |
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svd->U = PETSC_NULL;
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svd->V = PETSC_NULL;
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slepc |
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svd->nconv = -1;
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svd->data = PETSC_NULL;
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svd->setupcalled = 0;
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ierr = PetscPublishAll(svd);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDDestroy"
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/*@
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SVDDestroy - Destroys the SVD context.
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Collective on SVD
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Input Parameter:
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. svd - eigensolver context obtained from SVDCreate()
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Level: beginner
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.seealso: SVDCreate(), SVDSetUp(), SVDSolve()
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@*/
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PetscErrorCode SVDDestroy(SVD svd)
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{
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PetscErrorCode ierr;
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slepc |
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int i;
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slepc |
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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if (--svd->refct > 0) PetscFunctionReturn(0);
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/* if memory was published with AMS then destroy it */
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ierr = PetscObjectDepublish(svd);CHKERRQ(ierr);
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if (svd->ops->destroy) {
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ierr = (*svd->ops->destroy)(svd); CHKERRQ(ierr);
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}
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slepc |
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if (svd->A) { ierr = MatDestroy(svd->A);CHKERRQ(ierr); }
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slepc |
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if (svd->AT) { ierr = MatDestroy(svd->AT);CHKERRQ(ierr); }
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slepc |
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if (svd->sigma) { ierr = PetscFree(svd->sigma);CHKERRQ(ierr); }
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if (svd->U) {
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for (i=0;i<svd->nconv;i++) {
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ierr = VecDestroy(svd->U[i]); CHKERRQ(ierr);
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}
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ierr = PetscFree(svd->U);CHKERRQ(ierr);
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slepc |
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}
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slepc |
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if (svd->V) {
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for (i=0;i<svd->nconv;i++) {
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ierr = VecDestroy(svd->V[i]);CHKERRQ(ierr);
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}
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ierr = PetscFree(svd->V);CHKERRQ(ierr);
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slepc |
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}
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PetscLogObjectDestroy(svd);
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PetscHeaderDestroy(svd);
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDSetType"
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/*@C
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SVDSetType - Selects the particular solver to be used in the SVD object.
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Collective on SVD
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Input Parameters:
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+ svd - the eigensolver context
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- type - a known method
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Options Database Key:
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. -svd_type <method> - Sets the method; use -help for a list
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of available methods
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Notes:
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See "slepc/include/slepcsvd.h" for available methods. The default
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is SVDEIGENSOLVER.
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Normally, it is best to use the SVDSetFromOptions() command and
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then set the SVD type from the options database rather than by using
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this routine. Using the options database provides the user with
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maximum flexibility in evaluating the different available methods.
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The SVDSetType() routine is provided for those situations where it
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is necessary to set the iterative solver independently of the command
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line or options database.
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Level: intermediate
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.seealso: SVDType
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@*/
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PetscErrorCode SVDSetType(SVD svd,SVDType type)
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{
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PetscErrorCode ierr,(*r)(SVD);
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PetscTruth match;
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PetscFunctionBegin;
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PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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PetscValidCharPointer(type,2);
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ierr = PetscTypeCompare((PetscObject)svd,type,&match);CHKERRQ(ierr);
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if (match) PetscFunctionReturn(0);
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if (svd->data) {
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/* destroy the old private SVD context */
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ierr = (*svd->ops->destroy)(svd); CHKERRQ(ierr);
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svd->data = 0;
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}
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ierr = PetscFListFind(svd->comm,SVDList,type,(void (**)(void)) &r);CHKERRQ(ierr);
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if (!r) SETERRQ1(1,"Unknown SVD type given: %s",type);
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svd->setupcalled = 0;
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ierr = PetscMemzero(svd->ops,sizeof(struct _SVDOps));CHKERRQ(ierr);
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ierr = (*r)(svd); CHKERRQ(ierr);
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ierr = PetscObjectChangeTypeName((PetscObject)svd,type);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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#define __FUNCT__ "SVDGetType"
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/*@C
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SVDGetType - Gets the SVD type as a string from the SVD object.
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Not Collective
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Input Parameter:
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. svd - the eigensolver context
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Output Parameter:
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. name - name of SVD method
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Level: intermediate
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310 |
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311 |
.seealso: SVDSetType()
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@*/
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313 |
PetscErrorCode SVDGetType(SVD svd,SVDType *type)
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{
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315 |
PetscFunctionBegin;
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316 |
PetscValidHeaderSpecific(svd,SVD_COOKIE,1);
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*type = svd->type_name;
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318 |
PetscFunctionReturn(0);
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}
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/*MC
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SVDRegisterDynamic - Adds a method to the eigenproblem solver package.
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Synopsis:
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325 |
SVDRegisterDynamic(char *name_solver,char *path,char *name_create,int (*routine_create)(SVD))
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326 |
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Not Collective
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328 |
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Input Parameters:
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330 |
+ name_solver - name of a new user-defined solver
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. path - path (either absolute or relative) the library containing this solver
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. name_create - name of routine to create the solver context
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- routine_create - routine to create the solver context
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Notes:
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SVDRegisterDynamic() may be called multiple times to add several user-defined solvers.
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337 |
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If dynamic libraries are used, then the fourth input argument (routine_create)
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is ignored.
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Sample usage:
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342 |
.vb
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SVDRegisterDynamic("my_solver",/home/username/my_lib/lib/libO/solaris/mylib.a,
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344 |
"MySolverCreate",MySolverCreate);
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345 |
.ve
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346 |
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|
347 |
Then, your solver can be chosen with the procedural interface via
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|
348 |
$ SVDSetType(svd,"my_solver")
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|
349 |
or at runtime via the option
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|
350 |
$ -svd_type my_solver
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|
351 |
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|
352 |
Level: advanced
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353 |
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|
354 |
Environmental variables such as ${PETSC_ARCH}, ${SLEPC_DIR},
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|
355 |
and others of the form ${any_environmental_variable} occuring in pathname will be
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|
356 |
replaced with appropriate values.
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|
357 |
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|
358 |
.seealso: SVDRegisterAll()
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|
359 |
|
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|
360 |
M*/
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|
361 |
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|
362 |
#undef __FUNCT__
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|
363 |
#define __FUNCT__ "SVDRegister"
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|
364 |
PetscErrorCode SVDRegister(const char *sname,const char *path,const char *name,int (*function)(SVD))
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|
365 |
{
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|
366 |
PetscErrorCode ierr;
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|
367 |
char fullname[256];
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|
368 |
|
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|
369 |
PetscFunctionBegin;
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|
370 |
ierr = PetscFListConcat(path,name,fullname);CHKERRQ(ierr);
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|
371 |
ierr = PetscFListAdd(&SVDList,sname,fullname,(void (*)(void))function);CHKERRQ(ierr);
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|
372 |
PetscFunctionReturn(0);
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|
373 |
}
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