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jroman |
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/*
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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SLEPc - Scalable Library for Eigenvalue Problem Computations
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Copyright (c) 2002-2011, Universitat Politecnica de Valencia, Spain
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This file is part of SLEPc.
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SLEPc is free software: you can redistribute it and/or modify it under the
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terms of version 3 of the GNU Lesser General Public License as published by
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the Free Software Foundation.
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SLEPc is distributed in the hope that it will be useful, but WITHOUT ANY
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WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for
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more details.
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You should have received a copy of the GNU Lesser General Public License
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along with SLEPc. If not, see <http://www.gnu.org/licenses/>.
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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*/
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#include <slepc-private/psimpl.h> /*I "slepcps.h" I*/
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#include <slepcblaslapack.h>
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| 2826 |
jroman |
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PetscErrorCode PSSolve_HEP_QR(PS,PetscScalar*,PetscScalar*);
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PetscErrorCode PSSolve_HEP_MRRR(PS,PetscScalar*,PetscScalar*);
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typedef PetscErrorCode (*solvefun)(PS,PetscScalar*,PetscScalar*);
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static const solvefun solve[] = {
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PSSolve_HEP_QR,
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PSSolve_HEP_MRRR
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};
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static const char *methodname[] = {
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"Implicit QR method (_steqr)",
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"Relatively Robust Representations (_stevr)"
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};
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| 2783 |
jroman |
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#undef __FUNCT__
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#define __FUNCT__ "PSAllocate_HEP"
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PetscErrorCode PSAllocate_HEP(PS ps,PetscInt ld)
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{
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PetscErrorCode ierr;
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PetscFunctionBegin;
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ierr = PSAllocateMat_Private(ps,PS_MAT_A);CHKERRQ(ierr);
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| 2789 |
jroman |
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ierr = PSAllocateMat_Private(ps,PS_MAT_Q);CHKERRQ(ierr);
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| 2783 |
jroman |
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ierr = PSAllocateMatReal_Private(ps,PS_MAT_T);CHKERRQ(ierr);
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PetscFunctionReturn(0);
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}
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jroman |
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/* 0 l k n-1
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jroman |
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-----------------------------------------
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|* · · |
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| * · · |
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| * · · |
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| * · · |
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|· · · · o o |
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| o o |
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| o o |
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| o o |
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| o o |
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| o o |
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|· · · · o o o o o o o x |
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| x x x |
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| x x x |
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| x x x |
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| x x x |
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| x x x |
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| x x x |
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| x x x |
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| x x x|
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| x x|
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-----------------------------------------
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*/
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jroman |
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#undef __FUNCT__
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jroman |
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#define __FUNCT__ "PSSwitchFormat_HEP"
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PetscErrorCode PSSwitchFormat_HEP(PS ps,PetscBool tocompact)
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{
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PetscReal *T = ps->rmat[PS_MAT_T];
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PetscScalar *A = ps->mat[PS_MAT_A];
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PetscInt i,n=ps->n,k=ps->k,ld=ps->ld;
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PetscFunctionBegin;
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if (ps->compact==tocompact) PetscFunctionReturn(0);
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if (tocompact) { /* switch from dense (arrow) to compact storage */
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for (i=0;i<k;i++) {
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T[i] = PetscRealPart(A[i+i*ld]);
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T[i+ld] = PetscRealPart(A[k+i*ld]);
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}
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for (i=k;i<n;i++) {
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T[i] = PetscRealPart(A[i+i*ld]);
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T[i+ld] = PetscRealPart(A[i+1+i*ld]);
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}
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} else { /* switch from compact (arrow) to dense storage */
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for (i=0;i<k;i++) {
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A[i+i*ld] = T[i];
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A[k+i*ld] = T[i+ld];
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A[i+k*ld] = T[i+ld];
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}
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A[k+k*ld] = T[k];
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for (i=k+1;i<n;i++) {
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A[i+i*ld] = T[i];
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A[i-1+i*ld] = T[i-1+ld];
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A[i+(i-1)*ld] = T[i-1+ld];
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}
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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jroman |
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#define __FUNCT__ "PSView_HEP"
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PetscErrorCode PSView_HEP(PS ps,PetscViewer viewer)
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{
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PetscErrorCode ierr;
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jroman |
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PetscViewerFormat format;
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jroman |
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PetscInt i,j,r,c;
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PetscReal value;
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jroman |
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PetscFunctionBegin;
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jroman |
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ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
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if (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
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jroman |
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ierr = PetscViewerASCIIPrintf(viewer,"solving the problem with: %s\n",methodname[ps->method]);CHKERRQ(ierr);
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jroman |
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PetscFunctionReturn(0);
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jroman |
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}
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jroman |
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if (ps->compact) {
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ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
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if (format == PETSC_VIEWER_ASCII_MATLAB) {
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ierr = PetscViewerASCIIPrintf(viewer,"%% Size = %D %D\n",ps->n,ps->n);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer,"zzz = zeros(%D,3);\n",3*ps->n);CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer,"zzz = [\n");CHKERRQ(ierr);
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for (i=0;i<ps->n;i++) {
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ierr = PetscViewerASCIIPrintf(viewer,"%D %D %18.16e\n",i+1,i+1,*(ps->rmat[PS_MAT_T]+i));CHKERRQ(ierr);
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}
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for (i=0;i<ps->n-1;i++) {
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r = PetscMax(i+2,ps->k+1);
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c = i+1;
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ierr = PetscViewerASCIIPrintf(viewer,"%D %D %18.16e\n",r,c,*(ps->rmat[PS_MAT_T]+ps->ld+i));CHKERRQ(ierr);
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ierr = PetscViewerASCIIPrintf(viewer,"%D %D %18.16e\n",c,r,*(ps->rmat[PS_MAT_T]+ps->ld+i));CHKERRQ(ierr);
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}
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ierr = PetscViewerASCIIPrintf(viewer,"];\n%s = spconvert(zzz);\n",PSMatName[PS_MAT_T]);CHKERRQ(ierr);
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} else {
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for (i=0;i<ps->n;i++) {
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for (j=0;j<ps->n;j++) {
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if (i==j) value = *(ps->rmat[PS_MAT_T]+i);
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else if ((i<ps->k && j==ps->k) || (i==ps->k && j<ps->k)) value = *(ps->rmat[PS_MAT_T]+ps->ld+PetscMin(i,j));
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else if (i==j+1 && i>ps->k) value = *(ps->rmat[PS_MAT_T]+ps->ld+i-1);
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else if (i+1==j && j>ps->k) value = *(ps->rmat[PS_MAT_T]+ps->ld+j-1);
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else value = 0.0;
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ierr = PetscViewerASCIIPrintf(viewer," %18.16e ",value);CHKERRQ(ierr);
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}
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ierr = PetscViewerASCIIPrintf(viewer,"\n");CHKERRQ(ierr);
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}
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}
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ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
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ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
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} else {
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ierr = PSViewMat_Private(ps,viewer,PS_MAT_A);CHKERRQ(ierr);
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}
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jroman |
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if (ps->state>PS_STATE_INTERMEDIATE) {
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jroman |
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ierr = PSViewMat_Private(ps,viewer,PS_MAT_Q);CHKERRQ(ierr);
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jroman |
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}
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jroman |
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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jroman |
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#define __FUNCT__ "PSVectors_HEP"
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jroman |
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PetscErrorCode PSVectors_HEP(PS ps,PSMatType mat,PetscInt *j,PetscReal *rnorm)
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jroman |
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{
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PetscScalar *Q = ps->mat[PS_MAT_Q];
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PetscInt ld = ps->ld;
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PetscErrorCode ierr;
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PetscFunctionBegin;
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if (ps->state<PS_STATE_CONDENSED) SETERRQ(((PetscObject)ps)->comm,PETSC_ERR_ORDER,"Must call PSSolve() first");
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switch (mat) {
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case PS_MAT_X:
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case PS_MAT_Y:
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jroman |
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if (j) {
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ierr = PetscMemcpy(ps->mat[mat]+(*j)*ld,Q+(*j)*ld,ld*sizeof(PetscScalar));CHKERRQ(ierr);
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jroman |
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} else {
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ierr = PetscMemcpy(ps->mat[mat],Q,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
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}
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jroman |
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if (rnorm) *rnorm = PetscAbsScalar(Q[ps->n-1+(*j)*ld]);
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jroman |
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break;
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case PS_MAT_U:
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case PS_MAT_VT:
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SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented yet");
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break;
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default:
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SETERRQ(((PetscObject)ps)->comm,PETSC_ERR_ARG_OUTOFRANGE,"Invalid mat parameter");
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}
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PetscFunctionReturn(0);
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}
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#undef __FUNCT__
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jroman |
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#define __FUNCT__ "ArrowTridiag"
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jroman |
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/*
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jroman |
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ARROWTRIDIAG reduces a symmetric arrowhead matrix of the form
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[ d 0 0 0 e ]
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[ 0 d 0 0 e ]
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A = [ 0 0 d 0 e ]
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[ 0 0 0 d e ]
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[ e e e e d ]
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to tridiagonal form
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[ d e 0 0 0 ]
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[ e d e 0 0 ]
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T = Q'*A*Q = [ 0 e d e 0 ],
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[ 0 0 e d e ]
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[ 0 0 0 e d ]
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where Q is an orthogonal matrix. Rutishauser's algorithm is used to
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perform the reduction, which requires O(n**2) flops. The accumulation
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of the orthogonal factor Q, however, requires O(n**3) flops.
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Arguments
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=========
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N (input) INTEGER
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The order of the matrix A. N >= 0.
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D (input/output) DOUBLE PRECISION array, dimension (N)
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On entry, the diagonal entries of the matrix A to be
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reduced.
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On exit, the diagonal entries of the reduced matrix T.
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E (input/output) DOUBLE PRECISION array, dimension (N-1)
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On entry, the off-diagonal entries of the matrix A to be
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reduced.
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On exit, the subdiagonal entries of the reduced matrix T.
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Q (input/output) DOUBLE PRECISION array, dimension (LDQ, N)
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On exit, the orthogonal matrix Q.
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LDQ (input) INTEGER
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The leading dimension of the array Q.
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Note
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====
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Based on Fortran code contributed by Daniel Kressner
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jroman |
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*/
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jroman |
244 |
static PetscErrorCode ArrowTridiag(PetscBLASInt *n,PetscReal *d,PetscReal *e,PetscScalar *Q,PetscBLASInt *ldq)
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jroman |
245 |
{
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jroman |
246 |
PetscBLASInt i,j,j2,ld=*ldq,one=1;
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PetscReal c,s,p,off,temp;
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PetscFunctionBegin;
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if (*n<=2) PetscFunctionReturn(0);
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for (j=0;j<*n-2;j++) {
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/* Eliminate entry e(j) by a rotation in the planes (j,j+1) */
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temp = e[j+1];
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LAPACKlartg_(&temp,&e[j],&c,&s,&e[j+1]);
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s = -s;
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/* Apply rotation to diagonal elements */
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temp = d[j+1];
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e[j] = c*s*(temp-d[j]);
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d[j+1] = s*s*d[j] + c*c*temp;
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d[j] = c*c*d[j] + s*s*temp;
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/* Apply rotation to Q */
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j2 = j+2;
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BLASrot_(&j2,Q+j*ld,&one,Q+(j+1)*ld,&one,&c,&s);
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/* Chase newly introduced off-diagonal entry to the top left corner */
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for (i=j-1;i>=0;i--) {
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off = -s*e[i];
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e[i] = c*e[i];
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temp = e[i+1];
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LAPACKlartg_(&temp,&off,&c,&s,&e[i+1]);
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s = -s;
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temp = (d[i]-d[i+1])*s - 2.0*c*e[i];
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p = s*temp;
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d[i+1] += p;
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d[i] -= p;
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e[i] = -e[i] - c*temp;
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j2 = j+2;
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BLASrot_(&j2,Q+i*ld,&one,Q+(i+1)*ld,&one,&c,&s);
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}
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}
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PetscFunctionReturn(0);
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}
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| 2830 |
jroman |
288 |
#if 0
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| 2829 |
jroman |
289 |
#undef __FUNCT__
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#define __FUNCT__ "PSIntermediate_HEP_Flip"
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/*
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292 |
Reduce to tridiagonal form by flipping the matrix and using standard
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LAPACK tridiagonal reduction
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*/
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static PetscErrorCode PSIntermediate_HEP_Flip(PS ps)
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{
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| 2826 |
jroman |
297 |
#if defined(SLEPC_MISSING_LAPACK_SYTRD) || defined(SLEPC_MISSING_LAPACK_ORGTR)
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| 2783 |
jroman |
298 |
PetscFunctionBegin;
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| 2826 |
jroman |
299 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"SYTRD/ORGTR - Lapack routine is unavailable.");
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| 2783 |
jroman |
300 |
#else
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301 |
PetscErrorCode ierr;
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| 2796 |
jroman |
302 |
PetscInt i,j;
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| 2826 |
jroman |
303 |
PetscBLASInt n1,n2,n3,lwork,info,l,n,ld,off;
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304 |
PetscScalar *A,*S,*Q,*work,*tau;
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|
305 |
PetscReal *d,*e;
|
| 2783 |
jroman |
306 |
|
|
|
307 |
PetscFunctionBegin;
|
|
|
308 |
n = PetscBLASIntCast(ps->n);
|
| 2818 |
jroman |
309 |
l = PetscBLASIntCast(ps->l);
|
| 2783 |
jroman |
310 |
ld = PetscBLASIntCast(ps->ld);
|
| 2818 |
jroman |
311 |
n1 = PetscBLASIntCast(ps->k-l+1); /* size of leading block, excluding locked */
|
|
|
312 |
n2 = PetscBLASIntCast(n-ps->k-1); /* size of trailing block */
|
|
|
313 |
n3 = n1+n2;
|
|
|
314 |
off = l+l*ld;
|
| 2821 |
jroman |
315 |
A = ps->mat[PS_MAT_A];
|
| 2789 |
jroman |
316 |
Q = ps->mat[PS_MAT_Q];
|
| 2783 |
jroman |
317 |
d = ps->rmat[PS_MAT_T];
|
|
|
318 |
e = ps->rmat[PS_MAT_T]+ld;
|
| 2818 |
jroman |
319 |
ierr = PetscMemzero(Q,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
320 |
for (i=0;i<n;i++) Q[i+i*ld] = 1.0;
|
| 2783 |
jroman |
321 |
|
| 2796 |
jroman |
322 |
if (ps->compact) {
|
|
|
323 |
|
| 2787 |
jroman |
324 |
/* reduce to tridiagonal form */
|
| 2796 |
jroman |
325 |
if (ps->state<PS_STATE_INTERMEDIATE) {
|
|
|
326 |
|
|
|
327 |
ierr = PSAllocateMat_Private(ps,PS_MAT_W);CHKERRQ(ierr);
|
|
|
328 |
S = ps->mat[PS_MAT_W];
|
|
|
329 |
ierr = PetscMemzero(S,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
330 |
ierr = PSAllocateWork_Private(ps,ld+ld*ld,0,0);CHKERRQ(ierr);
|
|
|
331 |
tau = ps->work;
|
|
|
332 |
work = ps->work+ld;
|
|
|
333 |
lwork = ld*ld;
|
|
|
334 |
|
|
|
335 |
/* Flip matrix S */
|
| 2818 |
jroman |
336 |
for (i=l;i<n;i++) S[(n3-1-i+l)+(n3-1-i+l)*ld] = d[i];
|
|
|
337 |
for (i=l;i<ps->k;i++) S[(n3-1-i+l)+(n3-1-ps->k+l)*ld] = e[i];
|
|
|
338 |
for (i=ps->k;i<n-1;i++) S[(n3-1-i+l)+(n3-1-i-1+l)*ld] = e[i];
|
| 2796 |
jroman |
339 |
|
|
|
340 |
/* Reduce (2,2)-block of flipped S to tridiagonal form */
|
| 2818 |
jroman |
341 |
LAPACKsytrd_("L",&n1,S+n2+n2*ld,&ld,d+l,e+l,tau,work,&lwork,&info);
|
| 2796 |
jroman |
342 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xSYTRD %d",info);
|
|
|
343 |
|
|
|
344 |
/* Flip back diag and subdiag, put them in d and e */
|
| 2818 |
jroman |
345 |
for (i=0;i<n1-1;i++) {
|
|
|
346 |
d[l+n1-i-1] = PetscRealPart(S[n2+i+(n2+i)*ld]);
|
|
|
347 |
e[l+n1-i-2] = PetscRealPart(S[n2+i+1+(n2+i)*ld]);
|
| 2796 |
jroman |
348 |
}
|
| 2818 |
jroman |
349 |
d[l] = PetscRealPart(S[n3-1+(n3-1)*ld]);
|
| 2796 |
jroman |
350 |
|
|
|
351 |
/* Compute the orthogonal matrix used for tridiagonalization */
|
|
|
352 |
LAPACKorgtr_("L",&n1,S+n2+n2*ld,&ld,tau,work,&lwork,&info);
|
|
|
353 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xORGTR %d",info);
|
|
|
354 |
|
|
|
355 |
/* Create full-size Q, flipped back to original order */
|
|
|
356 |
for (i=0;i<n1;i++)
|
|
|
357 |
for (j=0;j<n1;j++)
|
| 2818 |
jroman |
358 |
Q[l+i+(l+j)*ld] = S[n3-i-1+(n3-j-1)*ld];
|
| 2796 |
jroman |
359 |
|
|
|
360 |
}
|
|
|
361 |
|
| 2787 |
jroman |
362 |
} else {
|
| 2796 |
jroman |
363 |
|
| 2818 |
jroman |
364 |
for (i=0;i<l;i++) { d[i] = PetscRealPart(A[i+i*ld]); e[i] = 0.0; }
|
| 2796 |
jroman |
365 |
|
|
|
366 |
if (ps->state<PS_STATE_INTERMEDIATE) {
|
| 2821 |
jroman |
367 |
ierr = PSCopyMatrix_Private(ps,PS_MAT_Q,PS_MAT_A);CHKERRQ(ierr);
|
| 2796 |
jroman |
368 |
ierr = PSAllocateWork_Private(ps,ld+ld*ld,0,0);CHKERRQ(ierr);
|
|
|
369 |
tau = ps->work;
|
|
|
370 |
work = ps->work+ld;
|
|
|
371 |
lwork = ld*ld;
|
| 2818 |
jroman |
372 |
LAPACKsytrd_("L",&n3,Q+off,&ld,d+l,e+l,tau,work,&lwork,&info);
|
| 2796 |
jroman |
373 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xSYTRD %d",info);
|
| 2818 |
jroman |
374 |
LAPACKorgtr_("L",&n3,Q+off,&ld,tau,work,&lwork,&info);
|
| 2796 |
jroman |
375 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xORGTR %d",info);
|
|
|
376 |
} else {
|
| 2818 |
jroman |
377 |
/* copy tridiagonal to d,e */
|
|
|
378 |
for (i=l;i<n;i++) d[i] = PetscRealPart(A[i+i*ld]);
|
|
|
379 |
for (i=l;i<n-1;i++) e[i] = PetscRealPart(A[(i+1)+i*ld]);
|
| 2796 |
jroman |
380 |
}
|
| 2783 |
jroman |
381 |
}
|
| 2826 |
jroman |
382 |
PetscFunctionReturn(0);
|
|
|
383 |
#endif
|
|
|
384 |
}
|
| 2830 |
jroman |
385 |
#endif
|
| 2783 |
jroman |
386 |
|
| 2826 |
jroman |
387 |
#undef __FUNCT__
|
| 2829 |
jroman |
388 |
#define __FUNCT__ "PSIntermediate_HEP"
|
|
|
389 |
/*
|
|
|
390 |
Reduce to tridiagonal form by means of ArrowTridiag.
|
|
|
391 |
*/
|
|
|
392 |
static PetscErrorCode PSIntermediate_HEP(PS ps)
|
|
|
393 |
{
|
|
|
394 |
#if defined(SLEPC_MISSING_LAPACK_SYTRD) || defined(SLEPC_MISSING_LAPACK_ORGTR)
|
|
|
395 |
PetscFunctionBegin;
|
|
|
396 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"SYTRD/ORGTR - Lapack routine is unavailable.");
|
|
|
397 |
#else
|
|
|
398 |
PetscErrorCode ierr;
|
| 2830 |
jroman |
399 |
PetscInt i;
|
| 2829 |
jroman |
400 |
PetscBLASInt n1,n2,n3,lwork,info,l,n,ld,off;
|
| 2830 |
jroman |
401 |
PetscScalar *A,*Q,*work,*tau;
|
| 2829 |
jroman |
402 |
PetscReal *d,*e;
|
|
|
403 |
|
|
|
404 |
PetscFunctionBegin;
|
|
|
405 |
n = PetscBLASIntCast(ps->n);
|
|
|
406 |
l = PetscBLASIntCast(ps->l);
|
|
|
407 |
ld = PetscBLASIntCast(ps->ld);
|
|
|
408 |
n1 = PetscBLASIntCast(ps->k-l+1); /* size of leading block, excluding locked */
|
|
|
409 |
n2 = PetscBLASIntCast(n-ps->k-1); /* size of trailing block */
|
|
|
410 |
n3 = n1+n2;
|
|
|
411 |
off = l+l*ld;
|
|
|
412 |
A = ps->mat[PS_MAT_A];
|
|
|
413 |
Q = ps->mat[PS_MAT_Q];
|
|
|
414 |
d = ps->rmat[PS_MAT_T];
|
|
|
415 |
e = ps->rmat[PS_MAT_T]+ld;
|
|
|
416 |
ierr = PetscMemzero(Q,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
417 |
for (i=0;i<n;i++) Q[i+i*ld] = 1.0;
|
|
|
418 |
|
|
|
419 |
if (ps->compact) {
|
|
|
420 |
|
|
|
421 |
if (ps->state<PS_STATE_INTERMEDIATE) ArrowTridiag(&n1,d+l,e+l,Q+off,&ld);
|
|
|
422 |
|
|
|
423 |
} else {
|
|
|
424 |
|
|
|
425 |
for (i=0;i<l;i++) { d[i] = PetscRealPart(A[i+i*ld]); e[i] = 0.0; }
|
|
|
426 |
|
|
|
427 |
if (ps->state<PS_STATE_INTERMEDIATE) {
|
|
|
428 |
ierr = PSCopyMatrix_Private(ps,PS_MAT_Q,PS_MAT_A);CHKERRQ(ierr);
|
|
|
429 |
ierr = PSAllocateWork_Private(ps,ld+ld*ld,0,0);CHKERRQ(ierr);
|
|
|
430 |
tau = ps->work;
|
|
|
431 |
work = ps->work+ld;
|
|
|
432 |
lwork = ld*ld;
|
|
|
433 |
LAPACKsytrd_("L",&n3,Q+off,&ld,d+l,e+l,tau,work,&lwork,&info);
|
|
|
434 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xSYTRD %d",info);
|
|
|
435 |
LAPACKorgtr_("L",&n3,Q+off,&ld,tau,work,&lwork,&info);
|
|
|
436 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xORGTR %d",info);
|
|
|
437 |
} else {
|
|
|
438 |
/* copy tridiagonal to d,e */
|
|
|
439 |
for (i=l;i<n;i++) d[i] = PetscRealPart(A[i+i*ld]);
|
|
|
440 |
for (i=l;i<n-1;i++) e[i] = PetscRealPart(A[(i+1)+i*ld]);
|
|
|
441 |
}
|
|
|
442 |
}
|
|
|
443 |
PetscFunctionReturn(0);
|
|
|
444 |
#endif
|
|
|
445 |
}
|
|
|
446 |
|
|
|
447 |
#undef __FUNCT__
|
| 2826 |
jroman |
448 |
#define __FUNCT__ "PSSolve_HEP_QR"
|
|
|
449 |
PetscErrorCode PSSolve_HEP_QR(PS ps,PetscScalar *wr,PetscScalar *wi)
|
|
|
450 |
{
|
|
|
451 |
#if defined(SLEPC_MISSING_LAPACK_STEQR)
|
|
|
452 |
PetscFunctionBegin;
|
|
|
453 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"STEQR - Lapack routine is unavailable.");
|
|
|
454 |
#else
|
|
|
455 |
PetscErrorCode ierr;
|
|
|
456 |
PetscInt i;
|
|
|
457 |
PetscBLASInt n1,n2,n3,info,l,n,ld,off;
|
|
|
458 |
PetscScalar *A,*Q;
|
|
|
459 |
PetscReal *d,*e;
|
|
|
460 |
#if defined(PETSC_USE_COMPLEX)
|
|
|
461 |
PetscReal *ritz;
|
|
|
462 |
#endif
|
|
|
463 |
|
|
|
464 |
PetscFunctionBegin;
|
|
|
465 |
n = PetscBLASIntCast(ps->n);
|
|
|
466 |
l = PetscBLASIntCast(ps->l);
|
|
|
467 |
ld = PetscBLASIntCast(ps->ld);
|
|
|
468 |
n1 = PetscBLASIntCast(ps->k-l+1); /* size of leading block, excluding locked */
|
|
|
469 |
n2 = PetscBLASIntCast(n-ps->k-1); /* size of trailing block */
|
|
|
470 |
n3 = n1+n2;
|
|
|
471 |
off = l+l*ld;
|
|
|
472 |
A = ps->mat[PS_MAT_A];
|
|
|
473 |
Q = ps->mat[PS_MAT_Q];
|
|
|
474 |
d = ps->rmat[PS_MAT_T];
|
|
|
475 |
e = ps->rmat[PS_MAT_T]+ld;
|
|
|
476 |
|
|
|
477 |
/* Reduce to tridiagonal form */
|
|
|
478 |
ierr = PSIntermediate_HEP(ps);CHKERRQ(ierr);
|
|
|
479 |
|
| 2783 |
jroman |
480 |
/* Solve the tridiagonal eigenproblem */
|
| 2821 |
jroman |
481 |
for (i=0;i<l;i++) wr[i] = d[i];
|
| 2826 |
jroman |
482 |
|
|
|
483 |
ierr = PSAllocateWork_Private(ps,0,2*ld,0);CHKERRQ(ierr);
|
|
|
484 |
LAPACKsteqr_("V",&n3,d+l,e+l,Q+off,&ld,ps->rwork,&info);
|
|
|
485 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xSTEQR %d",info);
|
|
|
486 |
for (i=l;i<n;i++) wr[i] = d[i];
|
|
|
487 |
|
|
|
488 |
if (ps->compact) {
|
|
|
489 |
ierr = PetscMemzero(e,(n-1)*sizeof(PetscReal));CHKERRQ(ierr);
|
|
|
490 |
} else {
|
|
|
491 |
ierr = PetscMemzero(A,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
492 |
for (i=0;i<n;i++) A[i+i*ld] = d[i];
|
|
|
493 |
}
|
|
|
494 |
PetscFunctionReturn(0);
|
|
|
495 |
#endif
|
|
|
496 |
}
|
|
|
497 |
|
|
|
498 |
#undef __FUNCT__
|
|
|
499 |
#define __FUNCT__ "PSSolve_HEP_MRRR"
|
|
|
500 |
PetscErrorCode PSSolve_HEP_MRRR(PS ps,PetscScalar *wr,PetscScalar *wi)
|
|
|
501 |
{
|
|
|
502 |
#if defined(SLEPC_MISSING_LAPACK_STEVR)
|
|
|
503 |
PetscFunctionBegin;
|
|
|
504 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"STEVR - Lapack routine is unavailable.");
|
|
|
505 |
#else
|
|
|
506 |
PetscErrorCode ierr;
|
| 2831 |
jroman |
507 |
PetscInt i;
|
| 2826 |
jroman |
508 |
PetscBLASInt n1,n2,n3,lwork,liwork,info,l,n,m,ld,off,il,iu,*isuppz;
|
|
|
509 |
PetscScalar *A,*Q,*W,one=1.0,zero=0.0;
|
|
|
510 |
PetscReal *d,*e,abstol=0.0,vl,vu;
|
| 2819 |
jroman |
511 |
#if defined(PETSC_USE_COMPLEX)
|
| 2831 |
jroman |
512 |
PetscInt j;
|
| 2826 |
jroman |
513 |
PetscReal *ritz;
|
| 2819 |
jroman |
514 |
#endif
|
| 2826 |
jroman |
515 |
|
|
|
516 |
PetscFunctionBegin;
|
|
|
517 |
n = PetscBLASIntCast(ps->n);
|
|
|
518 |
l = PetscBLASIntCast(ps->l);
|
|
|
519 |
ld = PetscBLASIntCast(ps->ld);
|
|
|
520 |
n1 = PetscBLASIntCast(ps->k-l+1); /* size of leading block, excluding locked */
|
|
|
521 |
n2 = PetscBLASIntCast(n-ps->k-1); /* size of trailing block */
|
|
|
522 |
n3 = n1+n2;
|
|
|
523 |
off = l+l*ld;
|
|
|
524 |
A = ps->mat[PS_MAT_A];
|
|
|
525 |
Q = ps->mat[PS_MAT_Q];
|
|
|
526 |
d = ps->rmat[PS_MAT_T];
|
|
|
527 |
e = ps->rmat[PS_MAT_T]+ld;
|
|
|
528 |
|
|
|
529 |
/* Reduce to tridiagonal form */
|
|
|
530 |
ierr = PSIntermediate_HEP(ps);CHKERRQ(ierr);
|
|
|
531 |
|
|
|
532 |
/* Solve the tridiagonal eigenproblem */
|
|
|
533 |
for (i=0;i<l;i++) wr[i] = d[i];
|
|
|
534 |
|
|
|
535 |
if (ps->state<PS_STATE_INTERMEDIATE) { /* Q contains useful info */
|
|
|
536 |
ierr = PSAllocateMat_Private(ps,PS_MAT_W);CHKERRQ(ierr);
|
|
|
537 |
W = ps->mat[PS_MAT_W];
|
|
|
538 |
ierr = PSCopyMatrix_Private(ps,PS_MAT_W,PS_MAT_Q);CHKERRQ(ierr);
|
|
|
539 |
}
|
| 2819 |
jroman |
540 |
#if defined(PETSC_USE_COMPLEX)
|
| 2826 |
jroman |
541 |
ierr = PSAllocateMatReal_Private(ps,PS_MAT_Q);CHKERRQ(ierr);
|
|
|
542 |
#endif
|
|
|
543 |
lwork = 20*ld;
|
|
|
544 |
liwork = 10*ld;
|
|
|
545 |
ierr = PSAllocateWork_Private(ps,0,lwork+ld,liwork+2*ld);CHKERRQ(ierr);
|
|
|
546 |
isuppz = ps->iwork+liwork;
|
|
|
547 |
#if defined(PETSC_USE_COMPLEX)
|
|
|
548 |
ritz = ps->rwork+lwork;
|
|
|
549 |
LAPACKstevr_("V","A",&n3,d+l,e+l,&vl,&vu,&il,&iu,&abstol,&m,ritz+l,ps->rmat[PS_MAT_Q]+off,&ld,isuppz,ps->rwork,&lwork,ps->iwork,&liwork,&info);
|
|
|
550 |
for (i=l;i<n;i++) wr[i] = ritz[i];
|
| 2819 |
jroman |
551 |
#else
|
| 2826 |
jroman |
552 |
LAPACKstevr_("V","A",&n3,d+l,e+l,&vl,&vu,&il,&iu,&abstol,&m,wr+l,Q+off,&ld,isuppz,ps->rwork,&lwork,ps->iwork,&liwork,&info);
|
| 2819 |
jroman |
553 |
#endif
|
| 2826 |
jroman |
554 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack DSTEVR %d",info);
|
| 2819 |
jroman |
555 |
#if defined(PETSC_USE_COMPLEX)
|
| 2826 |
jroman |
556 |
for (i=l;i<n;i++)
|
|
|
557 |
for (j=l;j<n;j++)
|
|
|
558 |
Q[i+j*ld] = (ps->rmat[PS_MAT_Q])[i+j*ld];
|
| 2819 |
jroman |
559 |
#endif
|
| 2826 |
jroman |
560 |
if (ps->state<PS_STATE_INTERMEDIATE) { /* accumulate previous Q */
|
|
|
561 |
BLASgemm_("N","N",&n3,&n3,&n3,&one,W+off,&ld,Q+off,&ld,&zero,A+off,&ld);
|
|
|
562 |
ierr = PSCopyMatrix_Private(ps,PS_MAT_Q,PS_MAT_A);CHKERRQ(ierr);
|
| 2819 |
jroman |
563 |
}
|
| 2826 |
jroman |
564 |
for (i=l;i<n;i++) d[i] = wr[i];
|
|
|
565 |
|
| 2796 |
jroman |
566 |
if (ps->compact) {
|
|
|
567 |
ierr = PetscMemzero(e,(n-1)*sizeof(PetscReal));CHKERRQ(ierr);
|
|
|
568 |
} else {
|
|
|
569 |
ierr = PetscMemzero(A,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
570 |
for (i=0;i<n;i++) A[i+i*ld] = d[i];
|
|
|
571 |
}
|
| 2783 |
jroman |
572 |
PetscFunctionReturn(0);
|
|
|
573 |
#endif
|
|
|
574 |
}
|
|
|
575 |
|
|
|
576 |
#undef __FUNCT__
|
|
|
577 |
#define __FUNCT__ "PSSort_HEP"
|
|
|
578 |
PetscErrorCode PSSort_HEP(PS ps,PetscScalar *wr,PetscScalar *wi,PetscErrorCode (*comp_func)(PetscScalar,PetscScalar,PetscScalar,PetscScalar,PetscInt*,void*),void *comp_ctx)
|
|
|
579 |
{
|
|
|
580 |
PetscErrorCode ierr;
|
| 2818 |
jroman |
581 |
PetscInt n,l,i,*perm;
|
| 2792 |
jroman |
582 |
PetscScalar *A;
|
| 2791 |
jroman |
583 |
PetscReal *d;
|
| 2783 |
jroman |
584 |
|
|
|
585 |
PetscFunctionBegin;
|
| 2791 |
jroman |
586 |
n = ps->n;
|
| 2818 |
jroman |
587 |
l = ps->l;
|
| 2791 |
jroman |
588 |
d = ps->rmat[PS_MAT_T];
|
|
|
589 |
ierr = PSAllocateWork_Private(ps,0,0,ps->ld);CHKERRQ(ierr);
|
| 2783 |
jroman |
590 |
perm = ps->iwork;
|
| 2818 |
jroman |
591 |
ierr = PSSortEigenvaluesReal_Private(ps,l,n,d,perm,comp_func,comp_ctx);CHKERRQ(ierr);
|
|
|
592 |
for (i=l;i<n;i++) wr[i] = d[perm[i]];
|
|
|
593 |
ierr = PSPermuteColumns_Private(ps,l,n,PS_MAT_Q,perm);CHKERRQ(ierr);
|
| 2796 |
jroman |
594 |
if (ps->compact) {
|
| 2818 |
jroman |
595 |
for (i=l;i<n;i++) d[i] = PetscRealPart(wr[i]);
|
| 2796 |
jroman |
596 |
} else {
|
|
|
597 |
A = ps->mat[PS_MAT_A];
|
| 2818 |
jroman |
598 |
for (i=l;i<n;i++) A[i+i*ps->ld] = wr[i];
|
| 2796 |
jroman |
599 |
}
|
| 2783 |
jroman |
600 |
PetscFunctionReturn(0);
|
|
|
601 |
}
|
|
|
602 |
|
|
|
603 |
#undef __FUNCT__
|
|
|
604 |
#define __FUNCT__ "PSCond_HEP"
|
|
|
605 |
PetscErrorCode PSCond_HEP(PS ps,PetscReal *cond)
|
|
|
606 |
{
|
|
|
607 |
#if defined(PETSC_MISSING_LAPACK_GETRF) || defined(SLEPC_MISSING_LAPACK_GETRI) || defined(SLEPC_MISSING_LAPACK_LANGE) || defined(SLEPC_MISSING_LAPACK_LANHS)
|
|
|
608 |
PetscFunctionBegin;
|
|
|
609 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"GETRF/GETRI/LANGE/LANHS - Lapack routines are unavailable.");
|
|
|
610 |
#else
|
|
|
611 |
PetscErrorCode ierr;
|
|
|
612 |
PetscScalar *work;
|
|
|
613 |
PetscReal *rwork;
|
|
|
614 |
PetscBLASInt *ipiv;
|
|
|
615 |
PetscBLASInt lwork,info,n,ld;
|
|
|
616 |
PetscReal hn,hin;
|
|
|
617 |
PetscScalar *A;
|
|
|
618 |
|
|
|
619 |
PetscFunctionBegin;
|
|
|
620 |
n = PetscBLASIntCast(ps->n);
|
|
|
621 |
ld = PetscBLASIntCast(ps->ld);
|
|
|
622 |
lwork = 8*ld;
|
|
|
623 |
ierr = PSAllocateWork_Private(ps,lwork,ld,ld);CHKERRQ(ierr);
|
|
|
624 |
work = ps->work;
|
|
|
625 |
rwork = ps->rwork;
|
|
|
626 |
ipiv = ps->iwork;
|
| 2813 |
jroman |
627 |
ierr = PSSwitchFormat_HEP(ps,PETSC_FALSE);CHKERRQ(ierr);
|
| 2783 |
jroman |
628 |
|
|
|
629 |
/* use workspace matrix W to avoid overwriting A */
|
| 2793 |
jroman |
630 |
ierr = PSAllocateMat_Private(ps,PS_MAT_W);CHKERRQ(ierr);
|
| 2783 |
jroman |
631 |
A = ps->mat[PS_MAT_W];
|
|
|
632 |
ierr = PetscMemcpy(A,ps->mat[PS_MAT_A],sizeof(PetscScalar)*ps->ld*ps->ld);CHKERRQ(ierr);
|
|
|
633 |
|
|
|
634 |
/* norm of A */
|
|
|
635 |
hn = LAPACKlange_("I",&n,&n,A,&ld,rwork);
|
|
|
636 |
|
|
|
637 |
/* norm of inv(A) */
|
|
|
638 |
LAPACKgetrf_(&n,&n,A,&ld,ipiv,&info);
|
|
|
639 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xGETRF %d",info);
|
|
|
640 |
LAPACKgetri_(&n,A,&ld,ipiv,work,&lwork,&info);
|
|
|
641 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xGETRI %d",info);
|
|
|
642 |
hin = LAPACKlange_("I",&n,&n,A,&ld,rwork);
|
|
|
643 |
|
|
|
644 |
*cond = hn*hin;
|
|
|
645 |
PetscFunctionReturn(0);
|
|
|
646 |
#endif
|
|
|
647 |
}
|
|
|
648 |
|
| 2814 |
jroman |
649 |
#undef __FUNCT__
|
|
|
650 |
#define __FUNCT__ "PSTranslateRKS_HEP"
|
|
|
651 |
PetscErrorCode PSTranslateRKS_HEP(PS ps,PetscScalar alpha)
|
|
|
652 |
{
|
|
|
653 |
#if defined(PETSC_MISSING_LAPACK_GEQRF) || defined(SLEPC_MISSING_LAPACK_ORGQR)
|
|
|
654 |
PetscFunctionBegin;
|
|
|
655 |
SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"GEQRF/ORGQR - Lapack routines are unavailable.");
|
|
|
656 |
#else
|
|
|
657 |
PetscErrorCode ierr;
|
|
|
658 |
PetscInt i,j,k=ps->k;
|
|
|
659 |
PetscScalar *Q,*A,*R,*tau,*work;
|
|
|
660 |
PetscBLASInt ld,n1,n0,lwork,info;
|
|
|
661 |
|
|
|
662 |
PetscFunctionBegin;
|
|
|
663 |
ld = PetscBLASIntCast(ps->ld);
|
|
|
664 |
ierr = PSAllocateWork_Private(ps,ld*ld,0,0);CHKERRQ(ierr);
|
|
|
665 |
tau = ps->work;
|
|
|
666 |
work = ps->work+ld;
|
|
|
667 |
lwork = PetscBLASIntCast(ld*(ld-1));
|
|
|
668 |
ierr = PSAllocateMat_Private(ps,PS_MAT_W);CHKERRQ(ierr);
|
|
|
669 |
A = ps->mat[PS_MAT_A];
|
|
|
670 |
Q = ps->mat[PS_MAT_Q];
|
|
|
671 |
R = ps->mat[PS_MAT_W];
|
|
|
672 |
/* Copy I+alpha*A */
|
|
|
673 |
ierr = PetscMemzero(Q,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
674 |
ierr = PetscMemzero(R,ld*ld*sizeof(PetscScalar));CHKERRQ(ierr);
|
|
|
675 |
for (i=0;i<k;i++) {
|
|
|
676 |
Q[i+i*ld] = 1.0 + alpha*A[i+i*ld];
|
|
|
677 |
Q[k+i*ld] = alpha*A[k+i*ld];
|
|
|
678 |
}
|
|
|
679 |
/* Compute qr */
|
|
|
680 |
n1 = PetscBLASIntCast(k+1);
|
|
|
681 |
n0 = PetscBLASIntCast(k);
|
|
|
682 |
LAPACKgeqrf_(&n1,&n0,Q,&ld,tau,work,&lwork,&info);
|
|
|
683 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xGEQRF %d",info);
|
|
|
684 |
/* Copy R from Q */
|
|
|
685 |
for (j=0;j<k;j++)
|
|
|
686 |
for(i=0;i<=j;i++)
|
|
|
687 |
R[i+j*ld] = Q[i+j*ld];
|
|
|
688 |
/* Compute orthogonal matrix in Q */
|
|
|
689 |
LAPACKorgqr_(&n1,&n1,&n0,Q,&ld,tau,work,&lwork,&info);
|
|
|
690 |
if (info) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in Lapack xORGQR %d",info);
|
|
|
691 |
/* Compute the updated matrix of projected problem */
|
|
|
692 |
for(j=0;j<k;j++){
|
|
|
693 |
for(i=0;i<k+1;i++)
|
|
|
694 |
A[j*ld+i] = Q[i*ld+j];
|
|
|
695 |
}
|
|
|
696 |
alpha = -1.0/alpha;
|
|
|
697 |
BLAStrsm_("R","U","N","N",&n1,&n0,&alpha,R,&ld,A,&ld);
|
|
|
698 |
for(i=0;i<k;i++)
|
|
|
699 |
A[ld*i+i]-=alpha;
|
|
|
700 |
PetscFunctionReturn(0);
|
|
|
701 |
#endif
|
|
|
702 |
}
|
|
|
703 |
|
| 2783 |
jroman |
704 |
EXTERN_C_BEGIN
|
|
|
705 |
#undef __FUNCT__
|
|
|
706 |
#define __FUNCT__ "PSCreate_HEP"
|
|
|
707 |
PetscErrorCode PSCreate_HEP(PS ps)
|
|
|
708 |
{
|
|
|
709 |
PetscFunctionBegin;
|
| 2819 |
jroman |
710 |
ps->nmeth = 2;
|
| 2783 |
jroman |
711 |
ps->ops->allocate = PSAllocate_HEP;
|
|
|
712 |
ps->ops->view = PSView_HEP;
|
| 2807 |
jroman |
713 |
ps->ops->vectors = PSVectors_HEP;
|
| 2826 |
jroman |
714 |
ps->ops->solve = solve[ps->method];
|
| 2783 |
jroman |
715 |
ps->ops->sort = PSSort_HEP;
|
|
|
716 |
ps->ops->cond = PSCond_HEP;
|
| 2814 |
jroman |
717 |
ps->ops->transrks = PSTranslateRKS_HEP;
|
| 2783 |
jroman |
718 |
PetscFunctionReturn(0);
|
|
|
719 |
}
|
|
|
720 |
EXTERN_C_END
|
|
|
721 |
|