| 1376 |
slepc |
1 |
/*
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| 1187 |
slepc |
2 |
This file implements a wrapper to the PRIMME library
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| 1376 |
slepc |
3 |
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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slepc |
5 |
SLEPc - Scalable Library for Eigenvalue Problem Computations
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eromero |
6 |
Copyright (c) 2002-2010, Universidad Politecnica de Valencia, Spain
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| 1376 |
slepc |
7 |
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slepc |
8 |
This file is part of SLEPc.
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SLEPc is free software: you can redistribute it and/or modify it under the
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terms of version 3 of the GNU Lesser General Public License as published by
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the Free Software Foundation.
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SLEPc is distributed in the hope that it will be useful, but WITHOUT ANY
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WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for
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more details.
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19 |
You should have received a copy of the GNU Lesser General Public License
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along with SLEPc. If not, see <http://www.gnu.org/licenses/>.
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| 1376 |
slepc |
21 |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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| 1187 |
slepc |
22 |
*/
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| 2001 |
eromero |
24 |
#include "petsc.h"
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| 1521 |
slepc |
25 |
#include "private/epsimpl.h" /*I "slepceps.h" I*/
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26 |
#include "private/stimpl.h"
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| 1187 |
slepc |
27 |
|
| 1947 |
jroman |
28 |
PetscErrorCode EPSSolve_PRIMME(EPS);
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29 |
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| 1187 |
slepc |
30 |
EXTERN_C_BEGIN
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31 |
#include "primme.h"
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32 |
EXTERN_C_END
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typedef struct {
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35 |
primme_params primme; /* param struc */
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36 |
primme_preset_method method; /* primme method */
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37 |
Mat A; /* problem matrix */
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| 2001 |
eromero |
38 |
EPS eps; /* EPS current context */
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39 |
KSP ksp; /* preconditioner */
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| 1189 |
slepc |
40 |
Vec x,y; /* auxiliar vectors */
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slepc |
41 |
} EPS_PRIMME;
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42 |
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| 1239 |
slepc |
43 |
const char *methodList[] = {
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44 |
"dynamic",
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45 |
"default_min_time",
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46 |
"default_min_matvecs",
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47 |
"arnoldi",
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48 |
"gd",
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49 |
"gd_plusk",
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50 |
"gd_olsen_plusk",
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51 |
"jd_olsen_plusk",
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52 |
"rqi",
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53 |
"jdqr",
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54 |
"jdqmr",
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55 |
"jdqmr_etol",
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56 |
"subspace_iteration",
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57 |
"lobpcg_orthobasis",
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58 |
"lobpcg_orthobasis_window"
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59 |
};
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60 |
EPSPRIMMEMethod methodN[] = {
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jroman |
61 |
EPS_PRIMME_DYNAMIC,
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62 |
EPS_PRIMME_DEFAULT_MIN_TIME,
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63 |
EPS_PRIMME_DEFAULT_MIN_MATVECS,
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64 |
EPS_PRIMME_ARNOLDI,
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EPS_PRIMME_GD,
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66 |
EPS_PRIMME_GD_PLUSK,
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67 |
EPS_PRIMME_GD_OLSEN_PLUSK,
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68 |
EPS_PRIMME_JD_OLSEN_PLUSK,
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69 |
EPS_PRIMME_RQI,
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70 |
EPS_PRIMME_JDQR,
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71 |
EPS_PRIMME_JDQMR,
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EPS_PRIMME_JDQMR_ETOL,
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73 |
EPS_PRIMME_SUBSPACE_ITERATION,
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74 |
EPS_PRIMME_LOBPCG_ORTHOBASIS,
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75 |
EPS_PRIMME_LOBPCG_ORTHOBASISW
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| 1239 |
slepc |
76 |
};
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| 1187 |
slepc |
77 |
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| 1239 |
slepc |
78 |
static void multMatvec_PRIMME(void *in, void *out, int *blockSize, primme_params *primme);
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79 |
static void applyPreconditioner_PRIMME(void *in, void *out, int *blockSize, struct primme_params *primme);
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80 |
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slepc |
81 |
void par_GlobalSumDouble(void *sendBuf, void *recvBuf, int *count, primme_params *primme) {
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| 1472 |
slepc |
82 |
PetscErrorCode ierr;
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83 |
ierr = MPI_Allreduce((double*)sendBuf, (double*)recvBuf, *count, MPI_DOUBLE, MPI_SUM, ((PetscObject)(primme->commInfo))->comm);CHKERRABORT(((PetscObject)(primme->commInfo))->comm,ierr);
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| 1187 |
slepc |
84 |
}
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85 |
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86 |
#undef __FUNCT__
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87 |
#define __FUNCT__ "EPSSetUp_PRIMME"
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88 |
PetscErrorCode EPSSetUp_PRIMME(EPS eps)
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89 |
{
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90 |
PetscErrorCode ierr;
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| 1509 |
slepc |
91 |
PetscMPIInt numProcs, procID;
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| 1187 |
slepc |
92 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
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93 |
primme_params *primme = &(((EPS_PRIMME *)eps->data)->primme);
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| 2001 |
eromero |
94 |
PetscTruth t;
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| 1187 |
slepc |
95 |
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96 |
PetscFunctionBegin;
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97 |
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| 1472 |
slepc |
98 |
ierr = MPI_Comm_size(((PetscObject)eps)->comm,&numProcs);CHKERRQ(ierr);
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99 |
ierr = MPI_Comm_rank(((PetscObject)eps)->comm,&procID);CHKERRQ(ierr);
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| 1187 |
slepc |
100 |
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| 1212 |
slepc |
101 |
/* Check some constraints and set some default values */
|
| 1928 |
jroman |
102 |
if (!eps->max_it) eps->max_it = PetscMax(1000,eps->n);
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| 1189 |
slepc |
103 |
ierr = STGetOperators(eps->OP, &ops->A, PETSC_NULL);
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| 1212 |
slepc |
104 |
if (!ops->A) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"The problem matrix has to be specified first");
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| 1187 |
slepc |
105 |
if (!eps->ishermitian)
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| 1189 |
slepc |
106 |
SETERRQ(PETSC_ERR_SUP,"PRIMME is only available for Hermitian problems");
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107 |
if (eps->isgeneralized)
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108 |
SETERRQ(PETSC_ERR_SUP,"PRIMME is not available for generalized problems");
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| 2104 |
eromero |
109 |
if (!eps->which) eps->which = EPS_LARGEST_REAL;
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110 |
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111 |
/* Change the default sigma to inf if necessary */
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112 |
if (eps->which == EPS_LARGEST_MAGNITUDE || eps->which == EPS_LARGEST_REAL ||
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113 |
eps->which == EPS_LARGEST_IMAGINARY) {
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|
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114 |
ierr = STSetDefaultShift(eps->OP, 3e300); CHKERRQ(ierr);
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|
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115 |
}
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116 |
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| 2003 |
eromero |
117 |
ierr = STSetUp(eps->OP); CHKERRQ(ierr);
|
| 2001 |
eromero |
118 |
ierr = PetscTypeCompare((PetscObject)eps->OP, STPRECOND, &t); CHKERRQ(ierr);
|
| 2003 |
eromero |
119 |
if (t == PETSC_FALSE) SETERRQ(PETSC_ERR_SUP, "PRIMME only works with precond spectral transformation");
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| 1187 |
slepc |
120 |
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121 |
/* Transfer SLEPc options to PRIMME options */
|
| 1928 |
jroman |
122 |
primme->n = eps->n;
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123 |
primme->nLocal = eps->nloc;
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| 1187 |
slepc |
124 |
primme->numEvals = eps->nev;
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| 1189 |
slepc |
125 |
primme->matrix = ops;
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| 1212 |
slepc |
126 |
primme->commInfo = eps;
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| 1187 |
slepc |
127 |
primme->maxMatvecs = eps->max_it;
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128 |
primme->eps = eps->tol;
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129 |
primme->numProcs = numProcs;
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130 |
primme->procID = procID;
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| 1700 |
eromero |
131 |
primme->printLevel = 0;
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| 2001 |
eromero |
132 |
primme->correctionParams.precondition = 1;
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| 1187 |
slepc |
133 |
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| 1942 |
jroman |
134 |
if (!eps->which) eps->which = EPS_LARGEST_REAL;
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| 1187 |
slepc |
135 |
switch(eps->which) {
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| 1203 |
slepc |
136 |
case EPS_LARGEST_REAL:
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| 1187 |
slepc |
137 |
primme->target = primme_largest;
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|
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138 |
break;
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| 1203 |
slepc |
139 |
case EPS_SMALLEST_REAL:
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| 1187 |
slepc |
140 |
primme->target = primme_smallest;
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141 |
break;
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142 |
default:
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| 1203 |
slepc |
143 |
SETERRQ(PETSC_ERR_SUP,"PRIMME only allows EPS_LARGEST_REAL and EPS_SMALLEST_REAL for 'which' value");
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| 1187 |
slepc |
144 |
break;
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145 |
}
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| 1207 |
slepc |
146 |
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| 1239 |
slepc |
147 |
if (primme_set_method(ops->method, primme) < 0)
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148 |
SETERRQ(PETSC_ERR_SUP,"PRIMME method not valid");
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| 1187 |
slepc |
149 |
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| 1207 |
slepc |
150 |
/* If user sets ncv, maxBasisSize is modified. If not, ncv is set as maxBasisSize */
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|
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151 |
if (eps->ncv) primme->maxBasisSize = eps->ncv;
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152 |
else eps->ncv = primme->maxBasisSize;
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|
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153 |
if (eps->ncv < eps->nev+primme->maxBlockSize)
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154 |
SETERRQ(PETSC_ERR_SUP,"PRIMME needs ncv >= nev+maxBlockSize");
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| 1579 |
slepc |
155 |
if (eps->mpd) PetscInfo(eps,"Warning: parameter mpd ignored\n");
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| 1207 |
slepc |
156 |
|
| 1560 |
slepc |
157 |
if (eps->extraction) {
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|
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158 |
ierr = PetscInfo(eps,"Warning: extraction type ignored\n");CHKERRQ(ierr);
|
| 1426 |
slepc |
159 |
}
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|
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160 |
|
| 1187 |
slepc |
161 |
/* Set workspace */
|
| 1596 |
slepc |
162 |
ierr = EPSAllocateSolution(eps);CHKERRQ(ierr);
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| 1207 |
slepc |
163 |
|
| 2001 |
eromero |
164 |
/* Setup the preconditioner */
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|
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165 |
ops->eps = eps;
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| 1207 |
slepc |
166 |
if (primme->correctionParams.precondition) {
|
| 2001 |
eromero |
167 |
ierr = STGetKSP(eps->OP, &ops->ksp); CHKERRQ(ierr);
|
| 2003 |
eromero |
168 |
ierr = PetscTypeCompare((PetscObject)ops->ksp, KSPPREONLY, &t); CHKERRQ(ierr);
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|
|
169 |
if (t == PETSC_FALSE) SETERRQ(PETSC_ERR_SUP, "PRIMME only works with preonly ksp of the spectral transformation");
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| 1189 |
slepc |
170 |
primme->preconditioner = PETSC_NULL;
|
| 1187 |
slepc |
171 |
primme->applyPreconditioner = applyPreconditioner_PRIMME;
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|
|
172 |
}
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|
|
173 |
|
| 1212 |
slepc |
174 |
/* Prepare auxiliary vectors */
|
| 1928 |
jroman |
175 |
ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,eps->nloc,eps->n,PETSC_NULL,&ops->x);CHKERRQ(ierr);
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|
|
176 |
ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,eps->nloc,eps->n,PETSC_NULL,&ops->y);CHKERRQ(ierr);
|
| 1189 |
slepc |
177 |
|
| 1947 |
jroman |
178 |
/* dispatch solve method */
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|
|
179 |
if (eps->leftvecs) SETERRQ(PETSC_ERR_SUP,"Left vectors not supported in this solver");
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|
|
180 |
eps->ops->solve = EPSSolve_PRIMME;
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| 1187 |
slepc |
181 |
PetscFunctionReturn(0);
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|
|
182 |
}
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|
|
183 |
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|
184 |
#undef __FUNCT__
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|
|
185 |
#define __FUNCT__ "EPSSolve_PRIMME"
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|
|
186 |
PetscErrorCode EPSSolve_PRIMME(EPS eps)
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|
|
187 |
{
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|
|
188 |
PetscErrorCode ierr;
|
| 1201 |
slepc |
189 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
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|
|
190 |
PetscScalar *a;
|
| 1187 |
slepc |
191 |
#ifdef PETSC_USE_COMPLEX
|
| 1509 |
slepc |
192 |
PetscInt i;
|
| 1201 |
slepc |
193 |
PetscReal *evals;
|
| 1187 |
slepc |
194 |
#endif
|
|
|
195 |
|
|
|
196 |
PetscFunctionBegin;
|
|
|
197 |
|
| 1240 |
slepc |
198 |
/* Reset some parameters left from previous runs */
|
|
|
199 |
ops->primme.aNorm = 0.0;
|
| 1933 |
jroman |
200 |
ops->primme.initSize = eps->nini;
|
| 1240 |
slepc |
201 |
ops->primme.iseed[0] = -1;
|
|
|
202 |
|
| 1187 |
slepc |
203 |
/* Call PRIMME solver */
|
|
|
204 |
ierr = VecGetArray(eps->V[0], &a); CHKERRQ(ierr);
|
|
|
205 |
#ifndef PETSC_USE_COMPLEX
|
|
|
206 |
ierr = dprimme(eps->eigr, a, eps->errest, &ops->primme);
|
|
|
207 |
#else
|
| 1212 |
slepc |
208 |
/* PRIMME returns real eigenvalues, but SLEPc works with complex ones */
|
| 1201 |
slepc |
209 |
ierr = PetscMalloc(eps->ncv*sizeof(PetscReal),&evals); CHKERRQ(ierr);
|
|
|
210 |
ierr = zprimme(evals, (Complex_Z*)a, eps->errest, &ops->primme);
|
|
|
211 |
for (i=0;i<eps->ncv;i++)
|
|
|
212 |
eps->eigr[i] = evals[i];
|
|
|
213 |
ierr = PetscFree(evals); CHKERRQ(ierr);
|
| 1187 |
slepc |
214 |
#endif
|
|
|
215 |
ierr = VecRestoreArray(eps->V[0], &a); CHKERRQ(ierr);
|
|
|
216 |
|
|
|
217 |
switch(ierr) {
|
|
|
218 |
case 0: /* Successful */
|
|
|
219 |
break;
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|
|
220 |
|
|
|
221 |
case -1:
|
|
|
222 |
SETERRQ(PETSC_ERR_SUP,"PRIMME: Failed to open output file");
|
|
|
223 |
break;
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|
|
224 |
|
|
|
225 |
case -2:
|
|
|
226 |
SETERRQ(PETSC_ERR_SUP,"PRIMME: Insufficient integer or real workspace allocated");
|
|
|
227 |
break;
|
|
|
228 |
|
|
|
229 |
case -3:
|
|
|
230 |
SETERRQ(PETSC_ERR_SUP,"PRIMME: main_iter encountered a problem");
|
|
|
231 |
break;
|
|
|
232 |
|
|
|
233 |
default:
|
|
|
234 |
SETERRQ(PETSC_ERR_SUP,"PRIMME: some parameters wrong configured");
|
|
|
235 |
break;
|
|
|
236 |
}
|
|
|
237 |
|
| 1240 |
slepc |
238 |
eps->nconv = ops->primme.initSize >= 0 ? ops->primme.initSize : 0;
|
|
|
239 |
eps->reason = eps->ncv >= eps->nev ? EPS_CONVERGED_TOL : EPS_DIVERGED_ITS;
|
| 1236 |
slepc |
240 |
eps->its = ops->primme.stats.numOuterIterations;
|
|
|
241 |
eps->OP->applys = ops->primme.stats.numMatvecs;
|
| 1187 |
slepc |
242 |
|
|
|
243 |
PetscFunctionReturn(0);
|
|
|
244 |
}
|
|
|
245 |
|
| 1201 |
slepc |
246 |
#undef __FUNCT__
|
|
|
247 |
#define __FUNCT__ "multMatvec_PRIMME"
|
| 1239 |
slepc |
248 |
static void multMatvec_PRIMME(void *in, void *out, int *blockSize, primme_params *primme)
|
| 1187 |
slepc |
249 |
{
|
| 1212 |
slepc |
250 |
PetscErrorCode ierr;
|
| 1509 |
slepc |
251 |
PetscInt i, N = primme->n;
|
| 1212 |
slepc |
252 |
EPS_PRIMME *ops = (EPS_PRIMME *)primme->matrix;
|
|
|
253 |
Vec x = ops->x;
|
|
|
254 |
Vec y = ops->y;
|
|
|
255 |
Mat A = ops->A;
|
| 1187 |
slepc |
256 |
|
| 1201 |
slepc |
257 |
PetscFunctionBegin;
|
| 1187 |
slepc |
258 |
for (i=0;i<*blockSize;i++) {
|
|
|
259 |
/* build vectors using 'in' an 'out' workspace */
|
| 1201 |
slepc |
260 |
ierr = VecPlaceArray(x, (PetscScalar*)in+N*i ); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
261 |
ierr = VecPlaceArray(y, (PetscScalar*)out+N*i ); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
262 |
|
| 1201 |
slepc |
263 |
ierr = MatMult(A, x, y); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
264 |
|
| 1201 |
slepc |
265 |
ierr = VecResetArray(x); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
266 |
ierr = VecResetArray(y); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
267 |
}
|
| 1201 |
slepc |
268 |
PetscFunctionReturnVoid();
|
| 1187 |
slepc |
269 |
}
|
|
|
270 |
|
| 1201 |
slepc |
271 |
#undef __FUNCT__
|
|
|
272 |
#define __FUNCT__ "applyPreconditioner_PRIMME"
|
| 1239 |
slepc |
273 |
static void applyPreconditioner_PRIMME(void *in, void *out, int *blockSize, struct primme_params *primme)
|
| 1187 |
slepc |
274 |
{
|
| 1212 |
slepc |
275 |
PetscErrorCode ierr;
|
| 2001 |
eromero |
276 |
PetscInt i, N = primme->n, lits;
|
| 1212 |
slepc |
277 |
EPS_PRIMME *ops = (EPS_PRIMME *)primme->matrix;
|
|
|
278 |
Vec x = ops->x;
|
|
|
279 |
Vec y = ops->y;
|
| 1189 |
slepc |
280 |
|
| 1201 |
slepc |
281 |
PetscFunctionBegin;
|
| 1187 |
slepc |
282 |
for (i=0;i<*blockSize;i++) {
|
|
|
283 |
/* build vectors using 'in' an 'out' workspace */
|
| 1201 |
slepc |
284 |
ierr = VecPlaceArray(x, (PetscScalar*)in+N*i ); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
285 |
ierr = VecPlaceArray(y, (PetscScalar*)out+N*i ); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
286 |
|
| 2001 |
eromero |
287 |
ierr = KSPSolve(ops->ksp, x, y); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
288 |
ierr = KSPGetIterationNumber(ops->ksp, &lits); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
289 |
ops->eps->OP->lineariterations+= lits;
|
| 1187 |
slepc |
290 |
|
| 1201 |
slepc |
291 |
ierr = VecResetArray(x); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
292 |
ierr = VecResetArray(y); CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
293 |
}
|
| 1201 |
slepc |
294 |
PetscFunctionReturnVoid();
|
| 1187 |
slepc |
295 |
}
|
|
|
296 |
|
|
|
297 |
|
|
|
298 |
#undef __FUNCT__
|
|
|
299 |
#define __FUNCT__ "EPSDestroy_PRIMME"
|
|
|
300 |
PetscErrorCode EPSDestroy_PRIMME(EPS eps)
|
|
|
301 |
{
|
|
|
302 |
PetscErrorCode ierr;
|
|
|
303 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
|
|
|
304 |
|
|
|
305 |
PetscFunctionBegin;
|
|
|
306 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
307 |
|
|
|
308 |
primme_Free(&ops->primme);
|
| 1189 |
slepc |
309 |
ierr = VecDestroy(ops->x);CHKERRQ(ierr);
|
|
|
310 |
ierr = VecDestroy(ops->y);CHKERRQ(ierr);
|
| 1218 |
slepc |
311 |
ierr = PetscFree(eps->data);CHKERRQ(ierr);
|
| 1596 |
slepc |
312 |
ierr = EPSFreeSolution(eps);CHKERRQ(ierr);
|
| 1187 |
slepc |
313 |
|
| 1925 |
jroman |
314 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetBlockSize_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
315 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetMethod_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
316 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetBlockSize_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
317 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetMethod_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
318 |
|
| 1187 |
slepc |
319 |
PetscFunctionReturn(0);
|
|
|
320 |
}
|
|
|
321 |
|
|
|
322 |
#undef __FUNCT__
|
|
|
323 |
#define __FUNCT__ "EPSView_PRIMME"
|
|
|
324 |
PetscErrorCode EPSView_PRIMME(EPS eps,PetscViewer viewer)
|
|
|
325 |
{
|
| 1212 |
slepc |
326 |
PetscErrorCode ierr;
|
|
|
327 |
PetscTruth isascii;
|
| 1189 |
slepc |
328 |
primme_params *primme = &((EPS_PRIMME *)eps->data)->primme;
|
| 1239 |
slepc |
329 |
EPSPRIMMEMethod methodn;
|
|
|
330 |
|
| 1187 |
slepc |
331 |
PetscFunctionBegin;
|
| 1189 |
slepc |
332 |
ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
|
|
|
333 |
if (!isascii) {
|
| 1201 |
slepc |
334 |
SETERRQ1(1,"Viewer type %s not supported for EPSPRIMME",((PetscObject)viewer)->type_name);
|
| 1189 |
slepc |
335 |
}
|
|
|
336 |
|
| 1207 |
slepc |
337 |
ierr = PetscViewerASCIIPrintf(viewer,"PRIMME solver block size: %d\n",primme->maxBlockSize);CHKERRQ(ierr);
|
| 1239 |
slepc |
338 |
ierr = EPSPRIMMEGetMethod(eps, &methodn);CHKERRQ(ierr);
|
|
|
339 |
ierr = PetscViewerASCIIPrintf(viewer,"PRIMME solver method: %s\n", methodList[methodn]);CHKERRQ(ierr);
|
| 1189 |
slepc |
340 |
|
| 1700 |
eromero |
341 |
/* Display PRIMME params */
|
| 1634 |
slepc |
342 |
primme_display_params(*primme);
|
| 1700 |
eromero |
343 |
|
| 1187 |
slepc |
344 |
PetscFunctionReturn(0);
|
|
|
345 |
}
|
|
|
346 |
|
|
|
347 |
#undef __FUNCT__
|
|
|
348 |
#define __FUNCT__ "EPSSetFromOptions_PRIMME"
|
|
|
349 |
PetscErrorCode EPSSetFromOptions_PRIMME(EPS eps)
|
|
|
350 |
{
|
|
|
351 |
PetscErrorCode ierr;
|
|
|
352 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
|
|
|
353 |
PetscInt op;
|
|
|
354 |
PetscTruth flg;
|
|
|
355 |
|
|
|
356 |
PetscFunctionBegin;
|
|
|
357 |
|
| 2102 |
eromero |
358 |
ierr = PetscOptionsBegin(((PetscObject)eps)->comm,((PetscObject)eps)->prefix,"PRIMME Options","EPS");CHKERRQ(ierr);
|
| 1187 |
slepc |
359 |
|
|
|
360 |
op = ops->primme.maxBlockSize;
|
| 1203 |
slepc |
361 |
ierr = PetscOptionsInt("-eps_primme_block_size"," maximum block size","EPSPRIMMESetBlockSize",op,&op,&flg); CHKERRQ(ierr);
|
| 1187 |
slepc |
362 |
if (flg) {ierr = EPSPRIMMESetBlockSize(eps,op);CHKERRQ(ierr);}
|
|
|
363 |
op = 0;
|
|
|
364 |
ierr = PetscOptionsEList("-eps_primme_method","set method for solving the eigenproblem",
|
| 1446 |
slepc |
365 |
"EPSPRIMMESetMethod",methodList,15,methodList[1],&op,&flg); CHKERRQ(ierr);
|
| 1187 |
slepc |
366 |
if (flg) {ierr = EPSPRIMMESetMethod(eps, methodN[op]);CHKERRQ(ierr);}
|
|
|
367 |
|
| 2102 |
eromero |
368 |
ierr = PetscOptionsEnd();CHKERRQ(ierr);
|
| 1187 |
slepc |
369 |
|
|
|
370 |
PetscFunctionReturn(0);
|
|
|
371 |
}
|
|
|
372 |
|
|
|
373 |
EXTERN_C_BEGIN
|
|
|
374 |
#undef __FUNCT__
|
|
|
375 |
#define __FUNCT__ "EPSPRIMMESetBlockSize_PRIMME"
|
| 1509 |
slepc |
376 |
PetscErrorCode EPSPRIMMESetBlockSize_PRIMME(EPS eps,PetscInt bs)
|
| 1187 |
slepc |
377 |
{
|
|
|
378 |
EPS_PRIMME *ops = (EPS_PRIMME *) eps->data;
|
|
|
379 |
|
|
|
380 |
PetscFunctionBegin;
|
|
|
381 |
|
|
|
382 |
if (bs == PETSC_DEFAULT) ops->primme.maxBlockSize = 1;
|
|
|
383 |
else if (bs <= 0) {
|
|
|
384 |
SETERRQ(1, "PRIMME: wrong block size");
|
|
|
385 |
} else ops->primme.maxBlockSize = bs;
|
|
|
386 |
|
|
|
387 |
PetscFunctionReturn(0);
|
|
|
388 |
}
|
|
|
389 |
EXTERN_C_END
|
|
|
390 |
|
|
|
391 |
#undef __FUNCT__
|
|
|
392 |
#define __FUNCT__ "EPSPRIMMESetBlockSize"
|
| 1201 |
slepc |
393 |
/*@
|
| 1212 |
slepc |
394 |
EPSPRIMMESetBlockSize - The maximum block size the code will try to use.
|
|
|
395 |
The user should set
|
| 1187 |
slepc |
396 |
this based on the architecture specifics of the target computer,
|
|
|
397 |
as well as any a priori knowledge of multiplicities. The code does
|
|
|
398 |
NOT require BlockSize > 1 to find multiple eigenvalues. For some
|
|
|
399 |
methods, keeping BlockSize = 1 yields the best overall performance.
|
|
|
400 |
|
|
|
401 |
Collective on EPS
|
|
|
402 |
|
|
|
403 |
Input Parameters:
|
|
|
404 |
+ eps - the eigenproblem solver context
|
|
|
405 |
- bs - block size
|
|
|
406 |
|
|
|
407 |
Options Database Key:
|
| 1212 |
slepc |
408 |
. -eps_primme_block_size - Sets the max allowed block size value
|
| 1187 |
slepc |
409 |
|
| 1212 |
slepc |
410 |
Notes:
|
|
|
411 |
If the block size is not set, the value established by primme_initialize
|
|
|
412 |
is used.
|
| 1187 |
slepc |
413 |
|
|
|
414 |
Level: advanced
|
|
|
415 |
.seealso: EPSPRIMMEGetBlockSize()
|
|
|
416 |
@*/
|
| 1509 |
slepc |
417 |
PetscErrorCode EPSPRIMMESetBlockSize(EPS eps,PetscInt bs)
|
| 1187 |
slepc |
418 |
{
|
| 1509 |
slepc |
419 |
PetscErrorCode ierr, (*f)(EPS,PetscInt);
|
| 1187 |
slepc |
420 |
|
|
|
421 |
PetscFunctionBegin;
|
|
|
422 |
|
|
|
423 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
424 |
ierr = PetscObjectQueryFunction((PetscObject)eps,"EPSPRIMMESetBlockSize_C",(void (**)())&f);CHKERRQ(ierr);
|
|
|
425 |
if (f) {
|
|
|
426 |
ierr = (*f)(eps,bs);CHKERRQ(ierr);
|
|
|
427 |
}
|
|
|
428 |
|
|
|
429 |
PetscFunctionReturn(0);
|
|
|
430 |
}
|
|
|
431 |
|
|
|
432 |
EXTERN_C_BEGIN
|
|
|
433 |
#undef __FUNCT__
|
|
|
434 |
#define __FUNCT__ "EPSPRIMMEGetBlockSize_PRIMME"
|
| 1509 |
slepc |
435 |
PetscErrorCode EPSPRIMMEGetBlockSize_PRIMME(EPS eps,PetscInt *bs)
|
| 1187 |
slepc |
436 |
{
|
|
|
437 |
EPS_PRIMME *ops = (EPS_PRIMME *) eps->data;
|
|
|
438 |
|
|
|
439 |
PetscFunctionBegin;
|
|
|
440 |
|
|
|
441 |
if (bs) *bs = ops->primme.maxBlockSize;
|
|
|
442 |
|
|
|
443 |
PetscFunctionReturn(0);
|
|
|
444 |
}
|
|
|
445 |
EXTERN_C_END
|
|
|
446 |
|
|
|
447 |
#undef __FUNCT__
|
|
|
448 |
#define __FUNCT__ "EPSPRIMMEGetBlockSize"
|
| 1201 |
slepc |
449 |
/*@
|
| 1187 |
slepc |
450 |
EPSPRIMMEGetBlockSize - Get the maximum block size the code will try to use.
|
|
|
451 |
|
|
|
452 |
Collective on EPS
|
|
|
453 |
|
|
|
454 |
Input Parameters:
|
| 1206 |
slepc |
455 |
. eps - the eigenproblem solver context
|
| 1187 |
slepc |
456 |
|
|
|
457 |
Output Parameters:
|
| 1206 |
slepc |
458 |
. bs - returned block size
|
| 1187 |
slepc |
459 |
|
|
|
460 |
Level: advanced
|
|
|
461 |
.seealso: EPSPRIMMESetBlockSize()
|
|
|
462 |
@*/
|
| 1509 |
slepc |
463 |
PetscErrorCode EPSPRIMMEGetBlockSize(EPS eps,PetscInt *bs)
|
| 1187 |
slepc |
464 |
{
|
| 1509 |
slepc |
465 |
PetscErrorCode ierr, (*f)(EPS,PetscInt*);
|
| 1187 |
slepc |
466 |
|
|
|
467 |
PetscFunctionBegin;
|
|
|
468 |
|
|
|
469 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
470 |
ierr = PetscObjectQueryFunction((PetscObject)eps,"EPSPRIMMEGetBlockSize_C",(void (**)())&f);CHKERRQ(ierr);
|
|
|
471 |
if (f) {
|
|
|
472 |
ierr = (*f)(eps,bs);CHKERRQ(ierr);
|
|
|
473 |
}
|
|
|
474 |
|
|
|
475 |
PetscFunctionReturn(0);
|
|
|
476 |
}
|
|
|
477 |
|
|
|
478 |
EXTERN_C_BEGIN
|
|
|
479 |
#undef __FUNCT__
|
|
|
480 |
#define __FUNCT__ "EPSPRIMMESetMethod_PRIMME"
|
| 1190 |
slepc |
481 |
PetscErrorCode EPSPRIMMESetMethod_PRIMME(EPS eps, EPSPRIMMEMethod method)
|
| 1187 |
slepc |
482 |
{
|
|
|
483 |
EPS_PRIMME *ops = (EPS_PRIMME *) eps->data;
|
|
|
484 |
|
|
|
485 |
PetscFunctionBegin;
|
|
|
486 |
|
| 1446 |
slepc |
487 |
if (method == PETSC_DEFAULT) ops->method = DEFAULT_MIN_TIME;
|
| 1187 |
slepc |
488 |
else ops->method = (primme_preset_method)method;
|
| 1239 |
slepc |
489 |
|
| 1187 |
slepc |
490 |
PetscFunctionReturn(0);
|
|
|
491 |
}
|
|
|
492 |
EXTERN_C_END
|
|
|
493 |
|
|
|
494 |
#undef __FUNCT__
|
|
|
495 |
#define __FUNCT__ "EPSPRIMMESetMethod"
|
| 1201 |
slepc |
496 |
/*@
|
| 1187 |
slepc |
497 |
EPSPRIMMESetMethod - Sets the method for the PRIMME library.
|
|
|
498 |
|
|
|
499 |
Collective on EPS
|
|
|
500 |
|
|
|
501 |
Input Parameters:
|
| 1206 |
slepc |
502 |
+ eps - the eigenproblem solver context
|
| 1212 |
slepc |
503 |
- method - method that will be used by PRIMME. It must be one of:
|
| 1940 |
jroman |
504 |
EPS_PRIMME_DYNAMIC, EPS_PRIMME_DEFAULT_MIN_TIME(EPS_PRIMME_JDQMR_ETOL),
|
|
|
505 |
EPS_PRIMME_DEFAULT_MIN_MATVECS(EPS_PRIMME_GD_OLSEN_PLUSK), EPS_PRIMME_ARNOLDI,
|
|
|
506 |
EPS_PRIMME_GD, EPS_PRIMME_GD_PLUSK, EPS_PRIMME_GD_OLSEN_PLUSK,
|
|
|
507 |
EPS_PRIMME_JD_OLSEN_PLUSK, EPS_PRIMME_RQI, EPS_PRIMME_JDQR, EPS_PRIMME_JDQMR,
|
|
|
508 |
EPS_PRIMME_JDQMR_ETOL, EPS_PRIMME_SUBSPACE_ITERATION,
|
|
|
509 |
EPS_PRIMME_LOBPCG_ORTHOBASIS, EPS_PRIMME_LOBPCG_ORTHOBASISW
|
| 1187 |
slepc |
510 |
|
|
|
511 |
Options Database Key:
|
| 1206 |
slepc |
512 |
. -eps_primme_set_method - Sets the method for the PRIMME library.
|
| 1187 |
slepc |
513 |
|
| 1212 |
slepc |
514 |
Note:
|
| 1940 |
jroman |
515 |
If not set, the method defaults to EPS_PRIMME_DEFAULT_MIN_TIME.
|
| 1187 |
slepc |
516 |
|
|
|
517 |
Level: advanced
|
| 1364 |
slepc |
518 |
|
|
|
519 |
.seealso: EPSPRIMMEGetMethod(), EPSPRIMMEMethod
|
| 1187 |
slepc |
520 |
@*/
|
| 1190 |
slepc |
521 |
PetscErrorCode EPSPRIMMESetMethod(EPS eps, EPSPRIMMEMethod method)
|
| 1187 |
slepc |
522 |
{
|
| 1190 |
slepc |
523 |
PetscErrorCode ierr, (*f)(EPS,EPSPRIMMEMethod);
|
| 1187 |
slepc |
524 |
|
|
|
525 |
PetscFunctionBegin;
|
|
|
526 |
|
|
|
527 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
528 |
ierr = PetscObjectQueryFunction((PetscObject)eps,"EPSPRIMMESetMethod_C",(void (**)())&f);CHKERRQ(ierr);
|
|
|
529 |
if (f) {
|
|
|
530 |
ierr = (*f)(eps,method); CHKERRQ(ierr);
|
|
|
531 |
}
|
|
|
532 |
|
|
|
533 |
PetscFunctionReturn(0);
|
|
|
534 |
}
|
|
|
535 |
|
|
|
536 |
EXTERN_C_BEGIN
|
|
|
537 |
#undef __FUNCT__
|
|
|
538 |
#define __FUNCT__ "EPSPRIMMEGetMethod_PRIMME"
|
| 1190 |
slepc |
539 |
PetscErrorCode EPSPRIMMEGetMethod_PRIMME(EPS eps, EPSPRIMMEMethod *method)
|
| 1187 |
slepc |
540 |
{
|
|
|
541 |
EPS_PRIMME *ops = (EPS_PRIMME *) eps->data;
|
|
|
542 |
|
|
|
543 |
PetscFunctionBegin;
|
|
|
544 |
|
| 1239 |
slepc |
545 |
if (method)
|
|
|
546 |
*method = (EPSPRIMMEMethod)ops->method;
|
|
|
547 |
|
| 1187 |
slepc |
548 |
PetscFunctionReturn(0);
|
|
|
549 |
}
|
|
|
550 |
EXTERN_C_END
|
|
|
551 |
|
|
|
552 |
#undef __FUNCT__
|
|
|
553 |
#define __FUNCT__ "EPSPRIMMEGetMethod"
|
|
|
554 |
/*@C
|
|
|
555 |
EPSPRIMMEGetMethod - Gets the method for the PRIMME library.
|
|
|
556 |
|
|
|
557 |
Mon Collective on EPS
|
|
|
558 |
|
|
|
559 |
Input Parameters:
|
| 1206 |
slepc |
560 |
. eps - the eigenproblem solver context
|
| 1187 |
slepc |
561 |
|
|
|
562 |
Output Parameters:
|
| 1212 |
slepc |
563 |
. method - method that will be used by PRIMME. It must be one of:
|
| 1940 |
jroman |
564 |
EPS_PRIMME_DYNAMIC, EPS_PRIMME_DEFAULT_MIN_TIME(EPS_PRIMME_JDQMR_ETOL),
|
|
|
565 |
EPS_PRIMME_DEFAULT_MIN_MATVECS(EPS_PRIMME_GD_OLSEN_PLUSK), EPS_PRIMME_ARNOLDI,
|
|
|
566 |
EPS_PRIMME_GD, EPS_PRIMME_GD_PLUSK, EPS_PRIMME_GD_OLSEN_PLUSK,
|
|
|
567 |
EPS_PRIMME_JD_OLSEN_PLUSK, EPS_PRIMME_RQI, EPS_PRIMME_JDQR, EPS_PRIMME_JDQMR,
|
|
|
568 |
EPS_PRIMME_JDQMR_ETOL, EPS_PRIMME_SUBSPACE_ITERATION,
|
|
|
569 |
EPS_PRIMME_LOBPCG_ORTHOBASIS, EPS_PRIMME_LOBPCG_ORTHOBASISW
|
| 1187 |
slepc |
570 |
|
|
|
571 |
Level: advanced
|
| 1364 |
slepc |
572 |
|
|
|
573 |
.seealso: EPSPRIMMESetMethod(), EPSPRIMMEMethod
|
| 1187 |
slepc |
574 |
@*/
|
| 1190 |
slepc |
575 |
PetscErrorCode EPSPRIMMEGetMethod(EPS eps, EPSPRIMMEMethod *method)
|
| 1187 |
slepc |
576 |
{
|
| 1190 |
slepc |
577 |
PetscErrorCode ierr, (*f)(EPS,EPSPRIMMEMethod*);
|
| 1187 |
slepc |
578 |
|
|
|
579 |
PetscFunctionBegin;
|
|
|
580 |
|
|
|
581 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
582 |
ierr = PetscObjectQueryFunction((PetscObject)eps,"EPSPRIMMEGetMethod_C",(void (**)())&f);CHKERRQ(ierr);
|
|
|
583 |
if (f) {
|
|
|
584 |
ierr = (*f)(eps,method); CHKERRQ(ierr);
|
|
|
585 |
}
|
|
|
586 |
|
|
|
587 |
PetscFunctionReturn(0);
|
|
|
588 |
}
|
|
|
589 |
|
|
|
590 |
EXTERN_C_BEGIN
|
|
|
591 |
#undef __FUNCT__
|
|
|
592 |
#define __FUNCT__ "EPSCreate_PRIMME"
|
|
|
593 |
PetscErrorCode EPSCreate_PRIMME(EPS eps)
|
|
|
594 |
{
|
|
|
595 |
PetscErrorCode ierr;
|
|
|
596 |
EPS_PRIMME *primme;
|
|
|
597 |
|
|
|
598 |
PetscFunctionBegin;
|
|
|
599 |
|
| 2001 |
eromero |
600 |
ierr = STSetType(eps->OP, STPRECOND); CHKERRQ(ierr);
|
| 2020 |
eromero |
601 |
ierr = STPrecondSetKSPHasMat(eps->OP, PETSC_TRUE); CHKERRQ(ierr);
|
| 2001 |
eromero |
602 |
|
| 1187 |
slepc |
603 |
ierr = PetscNew(EPS_PRIMME,&primme);CHKERRQ(ierr);
|
|
|
604 |
PetscLogObjectMemory(eps,sizeof(EPS_PRIMME));
|
|
|
605 |
eps->data = (void *) primme;
|
|
|
606 |
eps->ops->setup = EPSSetUp_PRIMME;
|
|
|
607 |
eps->ops->setfromoptions = EPSSetFromOptions_PRIMME;
|
|
|
608 |
eps->ops->destroy = EPSDestroy_PRIMME;
|
|
|
609 |
eps->ops->view = EPSView_PRIMME;
|
|
|
610 |
eps->ops->backtransform = EPSBackTransform_Default;
|
|
|
611 |
eps->ops->computevectors = EPSComputeVectors_Default;
|
|
|
612 |
|
|
|
613 |
primme_initialize(&primme->primme);
|
|
|
614 |
primme->primme.matrixMatvec = multMatvec_PRIMME;
|
| 1239 |
slepc |
615 |
primme->primme.globalSumDouble = par_GlobalSumDouble;
|
| 1940 |
jroman |
616 |
primme->method = (primme_preset_method)EPS_PRIMME_DEFAULT_MIN_TIME;
|
| 1942 |
jroman |
617 |
|
| 1187 |
slepc |
618 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetBlockSize_C","EPSPRIMMESetBlockSize_PRIMME",EPSPRIMMESetBlockSize_PRIMME);CHKERRQ(ierr);
|
|
|
619 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetMethod_C","EPSPRIMMESetMethod_PRIMME",EPSPRIMMESetMethod_PRIMME);CHKERRQ(ierr);
|
|
|
620 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetBlockSize_C","EPSPRIMMEGetBlockSize_PRIMME",EPSPRIMMEGetBlockSize_PRIMME);CHKERRQ(ierr);
|
|
|
621 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetMethod_C","EPSPRIMMEGetMethod_PRIMME",EPSPRIMMEGetMethod_PRIMME);CHKERRQ(ierr);
|
|
|
622 |
PetscFunctionReturn(0);
|
|
|
623 |
}
|
|
|
624 |
EXTERN_C_END
|