| 1619 |
slepc |
1 |
/*
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jroman |
2 |
Method: General Davidson Method (includes GD and JD)
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| 1619 |
slepc |
3 |
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References:
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- Ernest R. Davidson. Super-matrix methods. Computer Physics Communications,
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53:49–60, May 1989.
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jroman |
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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SLEPc - Scalable Library for Eigenvalue Problem Computations
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| 2116 |
eromero |
10 |
Copyright (c) 2002-2010, Universidad Politecnica de Valencia, Spain
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| 2110 |
jroman |
11 |
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This file is part of SLEPc.
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SLEPc is free software: you can redistribute it and/or modify it under the
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terms of version 3 of the GNU Lesser General Public License as published by
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the Free Software Foundation.
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SLEPc is distributed in the hope that it will be useful, but WITHOUT ANY
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WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for
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more details.
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You should have received a copy of the GNU Lesser General Public License
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along with SLEPc. If not, see <http://www.gnu.org/licenses/>.
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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| 1619 |
slepc |
26 |
*/
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#include "private/epsimpl.h"
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#include "private/stimpl.h"
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| 1985 |
eromero |
30 |
#include "davidson.h"
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| 1756 |
eromero |
31 |
#include "slepcblaslapack.h"
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| 1619 |
slepc |
32 |
|
| 1993 |
eromero |
33 |
PetscErrorCode EPSView_DAVIDSON(EPS eps,PetscViewer viewer);
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| 1982 |
eromero |
35 |
#undef __FUNCT__
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#define __FUNCT__ "EPSCreate_DAVIDSON"
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37 |
PetscErrorCode EPSCreate_DAVIDSON(EPS eps) {
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38 |
PetscErrorCode ierr;
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| 1985 |
eromero |
39 |
EPS_DAVIDSON *data;
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| 1756 |
eromero |
40 |
|
| 1982 |
eromero |
41 |
PetscFunctionBegin;
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42 |
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| 2000 |
eromero |
43 |
ierr = STSetType(eps->OP, STPRECOND); CHKERRQ(ierr);
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| 2020 |
eromero |
44 |
ierr = STPrecondSetKSPHasMat(eps->OP, PETSC_FALSE); CHKERRQ(ierr);
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| 1982 |
eromero |
45 |
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eps->OP->ops->getbilinearform = STGetBilinearForm_Default;
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eps->ops->solve = EPSSolve_DAVIDSON;
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48 |
eps->ops->setup = EPSSetUp_DAVIDSON;
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| 1992 |
eromero |
49 |
eps->ops->destroy = EPSDestroy_DAVIDSON;
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| 1982 |
eromero |
50 |
eps->ops->backtransform = EPSBackTransform_Default;
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eps->ops->computevectors = EPSComputeVectors_QZ;
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| 1993 |
eromero |
52 |
eps->ops->view = EPSView_DAVIDSON;
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| 1982 |
eromero |
53 |
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| 1985 |
eromero |
54 |
ierr = PetscMalloc(sizeof(EPS_DAVIDSON), &data); CHKERRQ(ierr);
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| 1982 |
eromero |
55 |
eps->data = data;
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| 2017 |
eromero |
56 |
data->pc = 0;
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| 1982 |
eromero |
57 |
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/* Set default values */
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ierr = EPSDAVIDSONSetKrylovStart_DAVIDSON(eps, PETSC_FALSE); CHKERRQ(ierr);
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ierr = EPSDAVIDSONSetBlockSize_DAVIDSON(eps, 1); CHKERRQ(ierr);
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ierr = EPSDAVIDSONSetRestart_DAVIDSON(eps, 6, 0); CHKERRQ(ierr);
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ierr = EPSDAVIDSONSetInitialSize_DAVIDSON(eps, 5); CHKERRQ(ierr);
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| 1995 |
eromero |
63 |
ierr = EPSDAVIDSONSetFix_DAVIDSON(eps, 0.01); CHKERRQ(ierr);
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| 1982 |
eromero |
64 |
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| 2021 |
eromero |
65 |
ierr = dvd_prof_init(); CHKERRQ(ierr);
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| 1982 |
eromero |
66 |
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PetscFunctionReturn(0);
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}
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70 |
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slepc |
71 |
#undef __FUNCT__
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| 1976 |
eromero |
72 |
#define __FUNCT__ "EPSSetUp_DAVIDSON"
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PetscErrorCode EPSSetUp_DAVIDSON(EPS eps) {
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| 1619 |
slepc |
74 |
PetscErrorCode ierr;
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| 1985 |
eromero |
75 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
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| 1619 |
slepc |
76 |
dvdDashboard *dvd = &data->ddb;
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77 |
dvdBlackboard b;
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| 1998 |
eromero |
78 |
PetscInt i,nvecs,nscalars,min_size_V,plusk,bs,initv;
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| 1619 |
slepc |
79 |
Mat A,B;
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80 |
KSP ksp;
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| 1867 |
eromero |
81 |
PC pc, pc2;
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| 2021 |
eromero |
82 |
PetscTruth t,ipB,ispositive;
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| 1976 |
eromero |
83 |
HarmType_t harm;
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InitType_t init;
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| 1995 |
eromero |
85 |
PetscReal fix;
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| 1619 |
slepc |
86 |
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PetscFunctionBegin;
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/* Setup EPS options and get the problem specification */
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| 2023 |
eromero |
90 |
ierr = EPSDAVIDSONGetBlockSize_DAVIDSON(eps, &bs); CHKERRQ(ierr);
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91 |
if (bs <= 0) bs = 1;
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| 1619 |
slepc |
92 |
if(eps->ncv) {
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| 2023 |
eromero |
93 |
if (eps->ncv<eps->nev) SETERRQ(PETSC_ERR_SUP,"The value of ncv must be at least nev");
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} else if (eps->mpd) eps->ncv = eps->mpd + eps->nev + bs;
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else if (eps->nev<500)
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96 |
eps->ncv = PetscMin(eps->n,PetscMax(2*eps->nev,eps->nev+15))+bs;
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else
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eps->ncv = PetscMin(eps->n,eps->nev+500)+bs;
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if (!eps->mpd) eps->mpd = eps->ncv;
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if (eps->mpd > eps->ncv)
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SETERRQ(PETSC_ERR_SUP,"The mpd has to be less or equal than ncv");
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102 |
if (eps->mpd < 2)
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103 |
SETERRQ(PETSC_ERR_SUP,"The mpd has to be greater than 2");
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| 1976 |
eromero |
104 |
if (!eps->max_it) eps->max_it = PetscMax(100,2*eps->n/eps->ncv);
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105 |
if (!eps->which) eps->which = EPS_LARGEST_MAGNITUDE;
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106 |
if (eps->ishermitian && (eps->which==EPS_LARGEST_IMAGINARY || eps->which==EPS_SMALLEST_IMAGINARY))
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| 2023 |
eromero |
107 |
SETERRQ(PETSC_ERR_SUP,"Wrong value of eps->which");
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108 |
if (!(eps->nev + bs <= eps->ncv))
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109 |
SETERRQ(PETSC_ERR_SUP, "The ncv has to be greater than nev plus blocksize!");
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| 1619 |
slepc |
110 |
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| 1980 |
eromero |
111 |
ierr = EPSDAVIDSONGetRestart_DAVIDSON(eps, &min_size_V, &plusk);
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112 |
CHKERRQ(ierr);
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| 2023 |
eromero |
113 |
if (!min_size_V) min_size_V = PetscMin(PetscMax(bs,5), eps->mpd/2);
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if (!(min_size_V+bs <= eps->mpd))
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115 |
SETERRQ(PETSC_ERR_SUP, "The value of minv must be less than mpd minus blocksize");
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| 1998 |
eromero |
116 |
ierr = EPSDAVIDSONGetInitialSize_DAVIDSON(eps, &initv); CHKERRQ(ierr);
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| 2023 |
eromero |
117 |
if (eps->mpd < initv)
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118 |
SETERRQ(PETSC_ERR_SUP,"The initv has to be less or equal than mpd");
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| 1619 |
slepc |
119 |
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| 2021 |
eromero |
120 |
/* Davidson solvers do not support left eigenvectors */
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121 |
if (eps->leftvecs) SETERRQ(PETSC_ERR_SUP,"Left vectors not supported in this solver");
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122 |
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| 2104 |
eromero |
123 |
/* Change the default sigma to inf if necessary */
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124 |
if (eps->which == EPS_LARGEST_MAGNITUDE || eps->which == EPS_LARGEST_REAL ||
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125 |
eps->which == EPS_LARGEST_IMAGINARY) {
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126 |
ierr = STSetDefaultShift(eps->OP, 3e300); CHKERRQ(ierr);
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127 |
}
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128 |
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| 1997 |
eromero |
129 |
/* Davidson solvers only support STPRECOND */
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| 2003 |
eromero |
130 |
ierr = STSetUp(eps->OP); CHKERRQ(ierr);
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| 1997 |
eromero |
131 |
ierr = PetscTypeCompare((PetscObject)eps->OP, STPRECOND, &t); CHKERRQ(ierr);
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| 2177 |
jroman |
132 |
if (!t) SETERRQ1(PETSC_ERR_SUP, "%s only works with precond spectral transformation",
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| 2003 |
eromero |
133 |
((PetscObject)eps)->type_name);
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| 2015 |
eromero |
134 |
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135 |
/* Extract pc from st->ksp */
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136 |
if (data->pc) { ierr = PCDestroy(data->pc); CHKERRQ(ierr); data->pc = 0; }
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| 1619 |
slepc |
137 |
ierr = STGetKSP(eps->OP, &ksp); CHKERRQ(ierr);
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138 |
ierr = KSPGetPC(ksp, &pc); CHKERRQ(ierr);
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| 1680 |
slepc |
139 |
ierr = PetscTypeCompare((PetscObject)pc, PCNONE, &t); CHKERRQ(ierr);
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| 2177 |
jroman |
140 |
if (t) {
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| 1680 |
slepc |
141 |
pc = 0;
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142 |
} else {
|
| 2015 |
eromero |
143 |
ierr = PetscObjectReference((PetscObject)pc); CHKERRQ(ierr);
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144 |
data->pc = pc;
|
| 1872 |
eromero |
145 |
ierr = PCCreate(((PetscObject)eps)->comm, &pc2); CHKERRQ(ierr);
|
| 1867 |
eromero |
146 |
ierr = PCSetType(pc2, PCNONE); CHKERRQ(ierr);
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| 1872 |
eromero |
147 |
ierr = KSPSetPC(ksp, pc2); CHKERRQ(ierr);
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148 |
ierr = PCDestroy(pc2); CHKERRQ(ierr);
|
| 1680 |
slepc |
149 |
}
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| 1619 |
slepc |
150 |
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151 |
/* Setup problem specification in dvd */
|
| 2015 |
eromero |
152 |
ierr = STGetOperators(eps->OP, &A, &B); CHKERRQ(ierr);
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| 1619 |
slepc |
153 |
ierr = PetscMemzero(dvd, sizeof(dvdDashboard)); CHKERRQ(ierr);
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| 2177 |
jroman |
154 |
dvd->A = A; dvd->B = eps->isgeneralized? B : PETSC_NULL;
|
| 2021 |
eromero |
155 |
ispositive = eps->ispositive;
|
| 1747 |
eromero |
156 |
dvd->sA = DVD_MAT_IMPLICIT |
|
| 2177 |
jroman |
157 |
(eps->ishermitian? DVD_MAT_HERMITIAN : 0) |
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158 |
((ispositive && !eps->isgeneralized) ? DVD_MAT_POS_DEF : 0);
|
| 1764 |
eromero |
159 |
/* Asume -eps_hermitian means hermitian-definite in generalized problems */
|
| 2177 |
jroman |
160 |
if (!ispositive && !eps->isgeneralized && eps->ishermitian) ispositive = PETSC_TRUE;
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|
|
161 |
if (!eps->isgeneralized)
|
| 1747 |
eromero |
162 |
dvd->sB = DVD_MAT_IMPLICIT | DVD_MAT_HERMITIAN | DVD_MAT_IDENTITY |
|
| 1764 |
eromero |
163 |
DVD_MAT_UNITARY | DVD_MAT_POS_DEF;
|
| 1747 |
eromero |
164 |
else
|
|
|
165 |
dvd->sB = DVD_MAT_IMPLICIT |
|
| 2177 |
jroman |
166 |
(eps->ishermitian? DVD_MAT_HERMITIAN : 0) |
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|
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167 |
(ispositive? DVD_MAT_POS_DEF : 0);
|
| 1976 |
eromero |
168 |
ipB = DVD_IS(dvd->sB, DVD_MAT_POS_DEF)?PETSC_TRUE:PETSC_FALSE;
|
| 2177 |
jroman |
169 |
dvd->sEP = ((!eps->isgeneralized || (eps->isgeneralized && ipB))? DVD_EP_STD : 0) |
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|
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170 |
(ispositive? DVD_EP_HERMITIAN : 0);
|
| 1619 |
slepc |
171 |
dvd->nev = eps->nev;
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|
|
172 |
dvd->which = eps->which;
|
| 1805 |
eromero |
173 |
switch(eps->which) {
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|
|
174 |
case EPS_TARGET_MAGNITUDE:
|
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|
175 |
case EPS_TARGET_REAL:
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|
176 |
case EPS_TARGET_IMAGINARY:
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|
|
177 |
dvd->withTarget = PETSC_TRUE;
|
| 1883 |
eromero |
178 |
dvd->target[0] = eps->target; dvd->target[1] = 1.0;
|
| 1805 |
eromero |
179 |
break;
|
| 1883 |
eromero |
180 |
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181 |
case EPS_LARGEST_MAGNITUDE:
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182 |
case EPS_LARGEST_REAL:
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|
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183 |
case EPS_LARGEST_IMAGINARY: //TODO: think about this case
|
| 1805 |
eromero |
184 |
default:
|
| 1984 |
eromero |
185 |
dvd->withTarget = PETSC_TRUE;
|
| 1883 |
eromero |
186 |
dvd->target[0] = 1.0; dvd->target[1] = 0.0;
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|
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187 |
break;
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|
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188 |
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189 |
case EPS_SMALLEST_MAGNITUDE:
|
|
|
190 |
case EPS_SMALLEST_REAL:
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|
|
191 |
case EPS_SMALLEST_IMAGINARY: //TODO: think about this case
|
| 1984 |
eromero |
192 |
dvd->withTarget = PETSC_TRUE;
|
| 1883 |
eromero |
193 |
dvd->target[0] = 0.0; dvd->target[1] = 1.0;
|
| 1805 |
eromero |
194 |
}
|
| 1619 |
slepc |
195 |
dvd->tol = eps->tol;
|
| 1805 |
eromero |
196 |
dvd->eps = eps;
|
| 1619 |
slepc |
197 |
|
| 1976 |
eromero |
198 |
/* Setup the extraction technique */
|
|
|
199 |
switch(eps->extraction) {
|
|
|
200 |
case 0:
|
|
|
201 |
case EPS_RITZ: harm = DVD_HARM_NONE; break;
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|
|
202 |
case EPS_HARMONIC: harm = DVD_HARM_RR; break;
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|
|
203 |
case EPS_HARMONIC_RELATIVE: harm = DVD_HARM_RRR; break;
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|
|
204 |
case EPS_HARMONIC_RIGHT: harm = DVD_HARM_REIGS; break;
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|
|
205 |
case EPS_HARMONIC_LARGEST: harm = DVD_HARM_LEIGS; break;
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|
|
206 |
default: SETERRQ(PETSC_ERR_SUP,"Unsupported extraction type");
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|
|
207 |
}
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|
|
208 |
|
|
|
209 |
/* Setup the type of starting subspace */
|
| 1980 |
eromero |
210 |
ierr = EPSDAVIDSONGetKrylovStart_DAVIDSON(eps, &t); CHKERRQ(ierr);
|
| 2177 |
jroman |
211 |
init = (!t)? DVD_INITV_CLASSIC : DVD_INITV_KRYLOV;
|
| 1976 |
eromero |
212 |
|
| 1747 |
eromero |
213 |
/* Setup IP */
|
| 2177 |
jroman |
214 |
if (ipB && dvd->B) {
|
| 1975 |
eromero |
215 |
ierr = IPSetBilinearForm(eps->ip, dvd->B, IP_INNER_HERMITIAN); CHKERRQ(ierr);
|
| 1764 |
eromero |
216 |
} else {
|
| 1975 |
eromero |
217 |
ierr = IPSetBilinearForm(eps->ip, 0, IP_INNER_HERMITIAN); CHKERRQ(ierr);
|
| 1764 |
eromero |
218 |
}
|
| 1747 |
eromero |
219 |
|
| 1995 |
eromero |
220 |
/* Get the fix parameter */
|
|
|
221 |
ierr = EPSDAVIDSONGetFix_DAVIDSON(eps, &fix); CHKERRQ(ierr);
|
|
|
222 |
|
| 1989 |
eromero |
223 |
/* Orthonormalize the DS */
|
| 2188 |
eromero |
224 |
ierr = dvd_orthV(eps->ip, PETSC_NULL, 0, PETSC_NULL, 0, eps->DS, 0,
|
|
|
225 |
PetscAbs(eps->nds), PETSC_NULL, 0, eps->rand); CHKERRQ(ierr);
|
| 1989 |
eromero |
226 |
|
| 1867 |
eromero |
227 |
/* Preconfigure dvd */
|
| 2023 |
eromero |
228 |
ierr = dvd_schm_basic_preconf(dvd, &b, eps->ncv, eps->mpd, min_size_V, bs,
|
| 2188 |
eromero |
229 |
initv,
|
|
|
230 |
PetscAbs(eps->nini),
|
| 1976 |
eromero |
231 |
plusk, pc, harm,
|
| 2042 |
eromero |
232 |
PETSC_NULL, init, eps->trackall);
|
| 1795 |
eromero |
233 |
CHKERRQ(ierr);
|
| 1619 |
slepc |
234 |
|
|
|
235 |
/* Reserve memory */
|
|
|
236 |
nvecs = b.max_size_auxV + b.own_vecs;
|
|
|
237 |
nscalars = b.own_scalars + b.max_size_auxS;
|
| 1975 |
eromero |
238 |
ierr = PetscMalloc((nvecs*eps->nloc+nscalars)*sizeof(PetscScalar), &data->wS);
|
| 1619 |
slepc |
239 |
CHKERRQ(ierr);
|
|
|
240 |
ierr = PetscMalloc(nvecs*sizeof(Vec), &data->wV); CHKERRQ(ierr);
|
| 1992 |
eromero |
241 |
data->size_wV = nvecs;
|
| 1619 |
slepc |
242 |
for (i=0; i<nvecs; i++) {
|
| 1975 |
eromero |
243 |
ierr = VecCreateMPIWithArray(((PetscObject)eps)->comm, eps->nloc, PETSC_DECIDE,
|
|
|
244 |
data->wS+i*eps->nloc, &data->wV[i]);
|
| 1619 |
slepc |
245 |
CHKERRQ(ierr);
|
|
|
246 |
}
|
|
|
247 |
b.free_vecs = data->wV;
|
| 1975 |
eromero |
248 |
b.free_scalars = data->wS + nvecs*eps->nloc;
|
| 1619 |
slepc |
249 |
dvd->auxV = data->wV + b.own_vecs;
|
|
|
250 |
dvd->auxS = b.free_scalars + b.own_scalars;
|
|
|
251 |
dvd->size_auxV = b.max_size_auxV;
|
|
|
252 |
dvd->size_auxS = b.max_size_auxS;
|
| 1805 |
eromero |
253 |
|
| 1619 |
slepc |
254 |
/* Configure dvd for a basic GD */
|
| 2023 |
eromero |
255 |
ierr = dvd_schm_basic_conf(dvd, &b, eps->ncv, eps->mpd, min_size_V, bs,
|
| 2188 |
eromero |
256 |
initv,
|
|
|
257 |
PetscAbs(eps->nini), plusk, pc,
|
| 1976 |
eromero |
258 |
eps->ip, harm, dvd->withTarget,
|
| 1980 |
eromero |
259 |
eps->target, ksp,
|
| 2042 |
eromero |
260 |
fix, init, eps->trackall);
|
| 1795 |
eromero |
261 |
CHKERRQ(ierr);
|
|
|
262 |
|
| 1619 |
slepc |
263 |
/* Associate the eigenvalues to the EPS */
|
|
|
264 |
eps->eigr = dvd->eigr;
|
|
|
265 |
eps->eigi = dvd->eigi;
|
|
|
266 |
eps->errest = dvd->errest;
|
| 1743 |
eromero |
267 |
eps->V = dvd->V;
|
|
|
268 |
|
| 1619 |
slepc |
269 |
PetscFunctionReturn(0);
|
|
|
270 |
}
|
|
|
271 |
|
|
|
272 |
|
|
|
273 |
#undef __FUNCT__
|
| 1976 |
eromero |
274 |
#define __FUNCT__ "EPSSolve_DAVIDSON"
|
|
|
275 |
PetscErrorCode EPSSolve_DAVIDSON(EPS eps) {
|
| 1985 |
eromero |
276 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1619 |
slepc |
277 |
dvdDashboard *d = &data->ddb;
|
| 2015 |
eromero |
278 |
KSP ksp;
|
|
|
279 |
PetscErrorCode ierr;
|
| 1619 |
slepc |
280 |
|
|
|
281 |
PetscFunctionBegin;
|
|
|
282 |
|
| 1883 |
eromero |
283 |
/* Call the starting routines */
|
|
|
284 |
DVD_FL_CALL(d->startList, d);
|
|
|
285 |
|
| 1619 |
slepc |
286 |
for(eps->its=0; eps->its < eps->max_it; eps->its++) {
|
| 1934 |
eromero |
287 |
/* Initialize V, if it is needed */
|
| 2021 |
eromero |
288 |
if (d->size_V == 0) { ierr = d->initV(d); CHKERRQ(ierr); }
|
| 1619 |
slepc |
289 |
|
|
|
290 |
/* Find the best approximated eigenpairs in V, X */
|
| 2021 |
eromero |
291 |
ierr = d->calcPairs(d); CHKERRQ(ierr);
|
| 1619 |
slepc |
292 |
|
| 1934 |
eromero |
293 |
/* Expand the subspace */
|
| 2021 |
eromero |
294 |
ierr = d->updateV(d); CHKERRQ(ierr);
|
| 1619 |
slepc |
295 |
|
| 1735 |
eromero |
296 |
/* Monitor progress */
|
| 1750 |
eromero |
297 |
eps->nconv = d->nconv;
|
| 1993 |
eromero |
298 |
EPSMonitor(eps, eps->its+1, eps->nconv, eps->eigr, eps->eigi, eps->errest, d->size_H+d->nconv);
|
| 1619 |
slepc |
299 |
|
| 1735 |
eromero |
300 |
/* Test for convergence */
|
| 1750 |
eromero |
301 |
if (eps->nconv >= eps->nev) break;
|
| 1883 |
eromero |
302 |
}
|
| 1675 |
slepc |
303 |
|
| 1883 |
eromero |
304 |
/* Call the ending routines */
|
|
|
305 |
DVD_FL_CALL(d->endList, d);
|
| 1735 |
eromero |
306 |
|
|
|
307 |
if( eps->nconv >= eps->nev ) eps->reason = EPS_CONVERGED_TOL;
|
| 1619 |
slepc |
308 |
else eps->reason = EPS_DIVERGED_ITS;
|
|
|
309 |
|
| 2015 |
eromero |
310 |
/* Merge the pc extracted from st->ksp in EPSSetUp_DAVIDSON */
|
|
|
311 |
if (data->pc) {
|
|
|
312 |
ierr = STGetKSP(eps->OP, &ksp); CHKERRQ(ierr);
|
|
|
313 |
ierr = KSPSetPC(ksp, data->pc); CHKERRQ(ierr);
|
|
|
314 |
ierr = PCDestroy(data->pc); CHKERRQ(ierr);
|
|
|
315 |
data->pc = 0;
|
|
|
316 |
}
|
|
|
317 |
|
| 1619 |
slepc |
318 |
PetscFunctionReturn(0);
|
|
|
319 |
}
|
|
|
320 |
|
| 1992 |
eromero |
321 |
|
| 1619 |
slepc |
322 |
#undef __FUNCT__
|
| 1992 |
eromero |
323 |
#define __FUNCT__ "EPSDestroy_DAVIDSON"
|
|
|
324 |
PetscErrorCode EPSDestroy_DAVIDSON(EPS eps) {
|
|
|
325 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
|
|
326 |
dvdDashboard *dvd = &data->ddb;
|
|
|
327 |
PetscErrorCode ierr;
|
|
|
328 |
PetscInt i;
|
|
|
329 |
|
|
|
330 |
PetscFunctionBegin;
|
|
|
331 |
|
|
|
332 |
/* Call step destructors and destroys the list */
|
|
|
333 |
DVD_FL_CALL(dvd->destroyList, dvd);
|
|
|
334 |
DVD_FL_DEL(dvd->destroyList);
|
|
|
335 |
DVD_FL_DEL(dvd->startList);
|
|
|
336 |
DVD_FL_DEL(dvd->endList);
|
|
|
337 |
|
|
|
338 |
for(i=0; i<data->size_wV; i++) {
|
|
|
339 |
ierr = VecDestroy(data->wV[i]); CHKERRQ(ierr);
|
|
|
340 |
}
|
|
|
341 |
ierr = PetscFree(data->wV);
|
|
|
342 |
ierr = PetscFree(data->wS);
|
|
|
343 |
ierr = PetscFree(data); CHKERRQ(ierr);
|
|
|
344 |
|
|
|
345 |
PetscFunctionReturn(0);
|
|
|
346 |
}
|
|
|
347 |
|
|
|
348 |
|
| 1993 |
eromero |
349 |
#undef __FUNCT__
|
|
|
350 |
#define __FUNCT__ "EPSView_DAVIDSON"
|
|
|
351 |
PetscErrorCode EPSView_DAVIDSON(EPS eps,PetscViewer viewer)
|
|
|
352 |
{
|
|
|
353 |
PetscErrorCode ierr;
|
|
|
354 |
PetscTruth isascii;
|
|
|
355 |
PetscInt opi, opi0;
|
|
|
356 |
PetscTruth opb;
|
|
|
357 |
const char* name;
|
|
|
358 |
|
|
|
359 |
PetscFunctionBegin;
|
|
|
360 |
|
|
|
361 |
name = ((PetscObject)eps)->type_name;
|
|
|
362 |
ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
|
|
|
363 |
if (!isascii) {
|
|
|
364 |
SETERRQ2(1,"Viewer type %s not supported for %s",((PetscObject)viewer)->type_name,name);
|
|
|
365 |
}
|
|
|
366 |
|
|
|
367 |
ierr = EPSDAVIDSONGetBlockSize_DAVIDSON(eps, &opi); CHKERRQ(ierr);
|
|
|
368 |
ierr = PetscViewerASCIIPrintf(viewer,"block size: %d\n", opi);CHKERRQ(ierr);
|
|
|
369 |
ierr = EPSDAVIDSONGetKrylovStart_DAVIDSON(eps, &opb); CHKERRQ(ierr);
|
| 2177 |
jroman |
370 |
if(!opb) {
|
| 1993 |
eromero |
371 |
ierr = PetscViewerASCIIPrintf(viewer,"type of the initial subspace: non-Krylov\n");CHKERRQ(ierr);
|
|
|
372 |
} else {
|
|
|
373 |
ierr = PetscViewerASCIIPrintf(viewer,"type of the initial subspace: Krylov\n");CHKERRQ(ierr);
|
|
|
374 |
}
|
|
|
375 |
ierr = EPSDAVIDSONGetRestart_DAVIDSON(eps, &opi, &opi0); CHKERRQ(ierr);
|
|
|
376 |
ierr = PetscViewerASCIIPrintf(viewer,"size of the subspace after restarting: %d\n", opi);CHKERRQ(ierr);
|
|
|
377 |
ierr = PetscViewerASCIIPrintf(viewer,"number of vectors after restarting from the previous iteration: %d\n", opi0);CHKERRQ(ierr);
|
|
|
378 |
|
|
|
379 |
PetscFunctionReturn(0);
|
|
|
380 |
}
|
|
|
381 |
|
|
|
382 |
|
| 1992 |
eromero |
383 |
#undef __FUNCT__
|
| 1976 |
eromero |
384 |
#define __FUNCT__ "SLEPcNotImplemented"
|
|
|
385 |
PetscErrorCode SLEPcNotImplemented() {
|
| 1619 |
slepc |
386 |
SETERRQ(1, "Not call this function!");
|
|
|
387 |
}
|
|
|
388 |
|
| 2012 |
eromero |
389 |
|
| 1619 |
slepc |
390 |
#undef __FUNCT__
|
| 1980 |
eromero |
391 |
#define __FUNCT__ "EPSDAVIDSONSetKrylovStart_DAVIDSON"
|
|
|
392 |
PetscErrorCode EPSDAVIDSONSetKrylovStart_DAVIDSON(EPS eps,PetscTruth krylovstart)
|
|
|
393 |
{
|
| 1985 |
eromero |
394 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1619 |
slepc |
395 |
|
|
|
396 |
PetscFunctionBegin;
|
| 1980 |
eromero |
397 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
398 |
|
|
|
399 |
data->krylovstart = krylovstart;
|
|
|
400 |
|
| 1619 |
slepc |
401 |
PetscFunctionReturn(0);
|
|
|
402 |
}
|
|
|
403 |
|
| 1980 |
eromero |
404 |
#undef __FUNCT__
|
|
|
405 |
#define __FUNCT__ "EPSDAVIDSONGetKrylovStart_DAVIDSON"
|
|
|
406 |
PetscErrorCode EPSDAVIDSONGetKrylovStart_DAVIDSON(EPS eps,PetscTruth *krylovstart)
|
|
|
407 |
{
|
| 1985 |
eromero |
408 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
409 |
|
|
|
410 |
PetscFunctionBegin;
|
|
|
411 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
412 |
|
|
|
413 |
*krylovstart = data->krylovstart;
|
|
|
414 |
|
|
|
415 |
PetscFunctionReturn(0);
|
|
|
416 |
}
|
|
|
417 |
|
|
|
418 |
#undef __FUNCT__
|
|
|
419 |
#define __FUNCT__ "EPSDAVIDSONSetBlockSize_DAVIDSON"
|
|
|
420 |
PetscErrorCode EPSDAVIDSONSetBlockSize_DAVIDSON(EPS eps,PetscInt blocksize)
|
|
|
421 |
{
|
| 1985 |
eromero |
422 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
423 |
|
|
|
424 |
PetscFunctionBegin;
|
|
|
425 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
426 |
|
|
|
427 |
if(blocksize == PETSC_DEFAULT || blocksize == PETSC_DECIDE) blocksize = 1;
|
|
|
428 |
if(blocksize <= 0)
|
|
|
429 |
SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid blocksize value");
|
|
|
430 |
data->blocksize = blocksize;
|
|
|
431 |
|
|
|
432 |
PetscFunctionReturn(0);
|
|
|
433 |
}
|
|
|
434 |
|
|
|
435 |
#undef __FUNCT__
|
|
|
436 |
#define __FUNCT__ "EPSDAVIDSONGetBlockSize_DAVIDSON"
|
|
|
437 |
PetscErrorCode EPSDAVIDSONGetBlockSize_DAVIDSON(EPS eps,PetscInt *blocksize)
|
|
|
438 |
{
|
| 1985 |
eromero |
439 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
440 |
|
|
|
441 |
PetscFunctionBegin;
|
|
|
442 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
443 |
|
|
|
444 |
*blocksize = data->blocksize;
|
|
|
445 |
|
|
|
446 |
PetscFunctionReturn(0);
|
|
|
447 |
}
|
|
|
448 |
|
|
|
449 |
#undef __FUNCT__
|
|
|
450 |
#define __FUNCT__ "EPSDAVIDSONSetRestart_DAVIDSON"
|
|
|
451 |
PetscErrorCode EPSDAVIDSONSetRestart_DAVIDSON(EPS eps,PetscInt minv,PetscInt plusk)
|
|
|
452 |
{
|
| 1985 |
eromero |
453 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
454 |
|
|
|
455 |
PetscFunctionBegin;
|
|
|
456 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
457 |
|
|
|
458 |
if(minv == PETSC_DEFAULT || minv == PETSC_DECIDE) minv = 5;
|
|
|
459 |
if(minv <= 0)
|
|
|
460 |
SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid minv value");
|
|
|
461 |
if(plusk == PETSC_DEFAULT || plusk == PETSC_DECIDE) plusk = 5;
|
| 1982 |
eromero |
462 |
if(plusk < 0)
|
| 1980 |
eromero |
463 |
SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid plusk value");
|
|
|
464 |
data->minv = minv;
|
|
|
465 |
data->plusk = plusk;
|
|
|
466 |
|
|
|
467 |
PetscFunctionReturn(0);
|
|
|
468 |
}
|
|
|
469 |
|
|
|
470 |
#undef __FUNCT__
|
|
|
471 |
#define __FUNCT__ "EPSDAVIDSONGetRestart_DAVIDSON"
|
|
|
472 |
PetscErrorCode EPSDAVIDSONGetRestart_DAVIDSON(EPS eps,PetscInt *minv,PetscInt *plusk)
|
|
|
473 |
{
|
| 1985 |
eromero |
474 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
475 |
|
|
|
476 |
PetscFunctionBegin;
|
|
|
477 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
478 |
|
|
|
479 |
*minv = data->minv;
|
|
|
480 |
*plusk = data->plusk;
|
|
|
481 |
|
|
|
482 |
PetscFunctionReturn(0);
|
|
|
483 |
}
|
|
|
484 |
|
|
|
485 |
#undef __FUNCT__
|
|
|
486 |
#define __FUNCT__ "EPSDAVIDSONGetInitialSize_DAVIDSON"
|
|
|
487 |
PetscErrorCode EPSDAVIDSONGetInitialSize_DAVIDSON(EPS eps,PetscInt *initialsize)
|
|
|
488 |
{
|
| 1985 |
eromero |
489 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
490 |
|
|
|
491 |
PetscFunctionBegin;
|
|
|
492 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
493 |
|
|
|
494 |
*initialsize = data->initialsize;
|
|
|
495 |
|
|
|
496 |
PetscFunctionReturn(0);
|
|
|
497 |
}
|
|
|
498 |
|
|
|
499 |
#undef __FUNCT__
|
|
|
500 |
#define __FUNCT__ "EPSDAVIDSONSetInitialSize_DAVIDSON"
|
|
|
501 |
PetscErrorCode EPSDAVIDSONSetInitialSize_DAVIDSON(EPS eps,PetscInt initialsize)
|
|
|
502 |
{
|
| 1985 |
eromero |
503 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
504 |
|
|
|
505 |
PetscFunctionBegin;
|
|
|
506 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
507 |
|
|
|
508 |
if(initialsize == PETSC_DEFAULT || initialsize == PETSC_DECIDE) initialsize = 5;
|
|
|
509 |
if(initialsize <= 0)
|
| 1995 |
eromero |
510 |
SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid initial size value");
|
| 1980 |
eromero |
511 |
data->initialsize = initialsize;
|
|
|
512 |
|
|
|
513 |
PetscFunctionReturn(0);
|
|
|
514 |
}
|
|
|
515 |
|
| 1995 |
eromero |
516 |
#undef __FUNCT__
|
|
|
517 |
#define __FUNCT__ "EPSDAVIDSONGetFix_DAVIDSON"
|
|
|
518 |
PetscErrorCode EPSDAVIDSONGetFix_DAVIDSON(EPS eps,PetscReal *fix)
|
|
|
519 |
{
|
|
|
520 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1980 |
eromero |
521 |
|
| 1995 |
eromero |
522 |
PetscFunctionBegin;
|
|
|
523 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
524 |
|
|
|
525 |
*fix = data->fix;
|
|
|
526 |
|
|
|
527 |
PetscFunctionReturn(0);
|
|
|
528 |
}
|
|
|
529 |
|
|
|
530 |
#undef __FUNCT__
|
|
|
531 |
#define __FUNCT__ "EPSDAVIDSONSetFix_DAVIDSON"
|
|
|
532 |
PetscErrorCode EPSDAVIDSONSetFix_DAVIDSON(EPS eps,PetscReal fix)
|
|
|
533 |
{
|
|
|
534 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
|
|
535 |
|
|
|
536 |
PetscFunctionBegin;
|
|
|
537 |
PetscValidHeaderSpecific(eps,EPS_COOKIE,1);
|
|
|
538 |
|
|
|
539 |
if(fix == PETSC_DEFAULT || fix == PETSC_DECIDE) fix = 0.01;
|
|
|
540 |
if(fix < 0.0)
|
|
|
541 |
SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid fix value");
|
|
|
542 |
data->fix = fix;
|
|
|
543 |
|
|
|
544 |
PetscFunctionReturn(0);
|
|
|
545 |
}
|
|
|
546 |
|
|
|
547 |
|
| 1619 |
slepc |
548 |
#undef __FUNCT__
|
| 1756 |
eromero |
549 |
#define __FUNCT__ "EPSComputeVectors_QZ"
|
|
|
550 |
/*
|
|
|
551 |
EPSComputeVectors_QZ - Compute eigenvectors from the vectors
|
|
|
552 |
provided by the eigensolver. This version is intended for solvers
|
|
|
553 |
that provide Schur vectors from the QZ decompositon. Given the partial
|
|
|
554 |
Schur decomposition OP*V=V*T, the following steps are performed:
|
|
|
555 |
1) compute eigenvectors of (S,T): S*Z=T*Z*D
|
|
|
556 |
2) compute eigenvectors of OP: X=V*Z
|
|
|
557 |
If left eigenvectors are required then also do Z'*Tl=D*Z', Y=W*Z
|
|
|
558 |
*/
|
|
|
559 |
PetscErrorCode EPSComputeVectors_QZ(EPS eps)
|
|
|
560 |
{
|
|
|
561 |
PetscErrorCode ierr;
|
| 1985 |
eromero |
562 |
EPS_DAVIDSON *data = (EPS_DAVIDSON*)eps->data;
|
| 1756 |
eromero |
563 |
dvdDashboard *d = &data->ddb;
|
| 1968 |
eromero |
564 |
PetscScalar *pX, *auxS;
|
|
|
565 |
PetscInt size_auxS;
|
| 2022 |
eromero |
566 |
|
| 1756 |
eromero |
567 |
PetscFunctionBegin;
|
| 1619 |
slepc |
568 |
|
| 1968 |
eromero |
569 |
/* Compute the eigenvectors associated to (cS, cT) */
|
|
|
570 |
ierr = PetscMalloc(sizeof(PetscScalar)*d->nconv*d->nconv, &pX); CHKERRQ(ierr);
|
|
|
571 |
size_auxS = 11*d->nconv + 4*d->nconv*d->nconv;
|
|
|
572 |
ierr = PetscMalloc(sizeof(PetscScalar)*size_auxS, &auxS); CHKERRQ(ierr);
|
|
|
573 |
ierr = dvd_compute_eigenvectors(d->nconv, d->cS, d->ldcS, d->cT, d->ldcT,
|
|
|
574 |
pX, d->nconv, PETSC_NULL, 0, auxS,
|
|
|
575 |
size_auxS, PETSC_FALSE); CHKERRQ(ierr);
|
| 1756 |
eromero |
576 |
|
| 1762 |
eromero |
577 |
/* pX[i] <- pX[i] / ||pX[i]|| */
|
| 1968 |
eromero |
578 |
ierr = SlepcDenseNorm(pX, d->nconv, d->nconv, d->nconv, d->ceigi);
|
| 1965 |
eromero |
579 |
CHKERRQ(ierr);
|
| 1762 |
eromero |
580 |
|
| 1756 |
eromero |
581 |
/* V <- cX * pX */
|
|
|
582 |
ierr = SlepcUpdateVectorsZ(eps->V, 0.0, 1.0, d->cX, d->size_cX, pX,
|
|
|
583 |
d->nconv, d->nconv, d->nconv); CHKERRQ(ierr);
|
|
|
584 |
|
|
|
585 |
ierr = PetscFree(pX); CHKERRQ(ierr);
|
|
|
586 |
ierr = PetscFree(auxS); CHKERRQ(ierr);
|
|
|
587 |
|
|
|
588 |
eps->evecsavailable = PETSC_TRUE;
|
|
|
589 |
|
|
|
590 |
PetscFunctionReturn(0);
|
|
|
591 |
}
|