| 1376 |
slepc |
1 |
/*
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| 1187 |
slepc |
2 |
This file implements a wrapper to the PRIMME library
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| 1376 |
slepc |
3 |
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4 |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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| 1672 |
slepc |
5 |
SLEPc - Scalable Library for Eigenvalue Problem Computations
|
| 2575 |
eromero |
6 |
Copyright (c) 2002-2011, Universitat Politecnica de Valencia, Spain
|
| 1376 |
slepc |
7 |
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| 1672 |
slepc |
8 |
This file is part of SLEPc.
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9 |
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10 |
SLEPc is free software: you can redistribute it and/or modify it under the
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11 |
terms of version 3 of the GNU Lesser General Public License as published by
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|
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12 |
the Free Software Foundation.
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13 |
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14 |
SLEPc is distributed in the hope that it will be useful, but WITHOUT ANY
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15 |
WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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16 |
FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for
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17 |
more details.
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|
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18 |
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19 |
You should have received a copy of the GNU Lesser General Public License
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20 |
along with SLEPc. If not, see <http://www.gnu.org/licenses/>.
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| 1376 |
slepc |
21 |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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| 1187 |
slepc |
22 |
*/
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23 |
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| 2283 |
jroman |
24 |
#include <petscsys.h>
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|
|
25 |
#include <private/epsimpl.h> /*I "slepceps.h" I*/
|
| 2654 |
jroman |
26 |
#include <private/stimpl.h>
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| 1187 |
slepc |
27 |
|
| 1947 |
jroman |
28 |
PetscErrorCode EPSSolve_PRIMME(EPS);
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|
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29 |
|
| 1187 |
slepc |
30 |
EXTERN_C_BEGIN
|
| 2283 |
jroman |
31 |
#include <primme.h>
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| 1187 |
slepc |
32 |
EXTERN_C_END
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|
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33 |
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|
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34 |
typedef struct {
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|
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35 |
primme_params primme; /* param struc */
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|
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36 |
primme_preset_method method; /* primme method */
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| 2718 |
jroman |
37 |
Mat A; /* problem matrix */
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|
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38 |
EPS eps; /* EPS current context */
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|
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39 |
KSP ksp; /* linear solver and preconditioner */
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|
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40 |
Vec x,y; /* auxiliary vectors */
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|
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41 |
PetscReal target; /* a copy of eps's target */
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| 1187 |
slepc |
42 |
} EPS_PRIMME;
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|
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43 |
|
| 1239 |
slepc |
44 |
EPSPRIMMEMethod methodN[] = {
|
| 1940 |
jroman |
45 |
EPS_PRIMME_DYNAMIC,
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|
|
46 |
EPS_PRIMME_DEFAULT_MIN_TIME,
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|
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47 |
EPS_PRIMME_DEFAULT_MIN_MATVECS,
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48 |
EPS_PRIMME_ARNOLDI,
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|
|
49 |
EPS_PRIMME_GD,
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|
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50 |
EPS_PRIMME_GD_PLUSK,
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|
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51 |
EPS_PRIMME_GD_OLSEN_PLUSK,
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|
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52 |
EPS_PRIMME_JD_OLSEN_PLUSK,
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|
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53 |
EPS_PRIMME_RQI,
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|
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54 |
EPS_PRIMME_JDQR,
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|
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55 |
EPS_PRIMME_JDQMR,
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|
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56 |
EPS_PRIMME_JDQMR_ETOL,
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|
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57 |
EPS_PRIMME_SUBSPACE_ITERATION,
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58 |
EPS_PRIMME_LOBPCG_ORTHOBASIS,
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59 |
EPS_PRIMME_LOBPCG_ORTHOBASISW
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| 1239 |
slepc |
60 |
};
|
| 1187 |
slepc |
61 |
|
| 2331 |
jroman |
62 |
static void multMatvec_PRIMME(void *in,void *out,int *blockSize,primme_params *primme);
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|
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63 |
static void applyPreconditioner_PRIMME(void *in,void *out,int *blockSize,struct primme_params *primme);
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| 1239 |
slepc |
64 |
|
| 2331 |
jroman |
65 |
void par_GlobalSumDouble(void *sendBuf,void *recvBuf,int *count,primme_params *primme)
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| 2317 |
jroman |
66 |
{
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| 1472 |
slepc |
67 |
PetscErrorCode ierr;
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| 2331 |
jroman |
68 |
ierr = MPI_Allreduce((double*)sendBuf,(double*)recvBuf,*count,MPI_DOUBLE,MPI_SUM,((PetscObject)(primme->commInfo))->comm);CHKERRABORT(((PetscObject)(primme->commInfo))->comm,ierr);
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| 1187 |
slepc |
69 |
}
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|
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70 |
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|
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71 |
#undef __FUNCT__
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72 |
#define __FUNCT__ "EPSSetUp_PRIMME"
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|
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73 |
PetscErrorCode EPSSetUp_PRIMME(EPS eps)
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|
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74 |
{
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|
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75 |
PetscErrorCode ierr;
|
| 2331 |
jroman |
76 |
PetscMPIInt numProcs,procID;
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| 2718 |
jroman |
77 |
EPS_PRIMME *ops = (EPS_PRIMME*)eps->data;
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|
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78 |
primme_params *primme = &ops->primme;
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| 2216 |
jroman |
79 |
PetscBool t;
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| 1187 |
slepc |
80 |
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|
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81 |
PetscFunctionBegin;
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| 1472 |
slepc |
82 |
ierr = MPI_Comm_size(((PetscObject)eps)->comm,&numProcs);CHKERRQ(ierr);
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83 |
ierr = MPI_Comm_rank(((PetscObject)eps)->comm,&procID);CHKERRQ(ierr);
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| 1187 |
slepc |
84 |
|
| 1212 |
slepc |
85 |
/* Check some constraints and set some default values */
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| 1928 |
jroman |
86 |
if (!eps->max_it) eps->max_it = PetscMax(1000,eps->n);
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| 2331 |
jroman |
87 |
ierr = STGetOperators(eps->OP,&ops->A,PETSC_NULL);
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| 2214 |
jroman |
88 |
if (!ops->A) SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_ARG_WRONGSTATE,"The problem matrix has to be specified first");
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| 1187 |
slepc |
89 |
if (!eps->ishermitian)
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| 2214 |
jroman |
90 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME is only available for Hermitian problems");
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| 1189 |
slepc |
91 |
if (eps->isgeneralized)
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| 2214 |
jroman |
92 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME is not available for generalized problems");
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| 2104 |
eromero |
93 |
if (!eps->which) eps->which = EPS_LARGEST_REAL;
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|
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94 |
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|
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95 |
/* Change the default sigma to inf if necessary */
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|
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96 |
if (eps->which == EPS_LARGEST_MAGNITUDE || eps->which == EPS_LARGEST_REAL ||
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97 |
eps->which == EPS_LARGEST_IMAGINARY) {
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| 2331 |
jroman |
98 |
ierr = STSetDefaultShift(eps->OP,3e300);CHKERRQ(ierr);
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| 2104 |
eromero |
99 |
}
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100 |
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| 2485 |
eromero |
101 |
/* Avoid setting the automatic shift when a target is set */
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102 |
ierr = STSetDefaultShift(eps->OP,0.0);CHKERRQ(ierr);
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|
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103 |
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| 2330 |
jroman |
104 |
ierr = STSetUp(eps->OP);CHKERRQ(ierr);
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| 2331 |
jroman |
105 |
ierr = PetscTypeCompare((PetscObject)eps->OP,STPRECOND,&t);CHKERRQ(ierr);
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106 |
if (!t) SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME only works with STPRECOND");
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| 1187 |
slepc |
107 |
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|
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108 |
/* Transfer SLEPc options to PRIMME options */
|
| 1928 |
jroman |
109 |
primme->n = eps->n;
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|
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110 |
primme->nLocal = eps->nloc;
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| 1187 |
slepc |
111 |
primme->numEvals = eps->nev;
|
| 1189 |
slepc |
112 |
primme->matrix = ops;
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| 1212 |
slepc |
113 |
primme->commInfo = eps;
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| 1187 |
slepc |
114 |
primme->maxMatvecs = eps->max_it;
|
| 2621 |
eromero |
115 |
primme->eps = eps->tol==PETSC_DEFAULT?SLEPC_DEFAULT_TOL:eps->tol;
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| 1187 |
slepc |
116 |
primme->numProcs = numProcs;
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|
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117 |
primme->procID = procID;
|
| 1700 |
eromero |
118 |
primme->printLevel = 0;
|
| 2001 |
eromero |
119 |
primme->correctionParams.precondition = 1;
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| 1187 |
slepc |
120 |
|
| 1942 |
jroman |
121 |
if (!eps->which) eps->which = EPS_LARGEST_REAL;
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| 1187 |
slepc |
122 |
switch(eps->which) {
|
| 1203 |
slepc |
123 |
case EPS_LARGEST_REAL:
|
| 1187 |
slepc |
124 |
primme->target = primme_largest;
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|
|
125 |
break;
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| 1203 |
slepc |
126 |
case EPS_SMALLEST_REAL:
|
| 1187 |
slepc |
127 |
primme->target = primme_smallest;
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|
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128 |
break;
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| 2485 |
eromero |
129 |
case EPS_TARGET_MAGNITUDE:
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|
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130 |
case EPS_TARGET_REAL:
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|
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131 |
primme->target = primme_closest_abs;
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|
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132 |
primme->numTargetShifts = 1;
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| 2718 |
jroman |
133 |
ops->target = PetscRealPart(eps->target);
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|
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134 |
primme->targetShifts = &ops->target;
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| 2485 |
eromero |
135 |
break;
|
| 1187 |
slepc |
136 |
default:
|
| 2485 |
eromero |
137 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"'which' value does not supported by PRIMME");
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| 1187 |
slepc |
138 |
break;
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|
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139 |
}
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| 1207 |
slepc |
140 |
|
| 2331 |
jroman |
141 |
if (primme_set_method(ops->method,primme) < 0)
|
| 2214 |
jroman |
142 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME method not valid");
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| 1187 |
slepc |
143 |
|
| 1207 |
slepc |
144 |
/* If user sets ncv, maxBasisSize is modified. If not, ncv is set as maxBasisSize */
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|
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145 |
if (eps->ncv) primme->maxBasisSize = eps->ncv;
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|
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146 |
else eps->ncv = primme->maxBasisSize;
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|
|
147 |
if (eps->ncv < eps->nev+primme->maxBlockSize)
|
| 2214 |
jroman |
148 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME needs ncv >= nev+maxBlockSize");
|
| 2499 |
jroman |
149 |
if (eps->mpd) { ierr = PetscInfo(eps,"Warning: parameter mpd ignored\n");CHKERRQ(ierr); }
|
| 1207 |
slepc |
150 |
|
| 2499 |
jroman |
151 |
if (eps->extraction) { ierr = PetscInfo(eps,"Warning: extraction type ignored\n");CHKERRQ(ierr); }
|
| 1426 |
slepc |
152 |
|
| 1187 |
slepc |
153 |
/* Set workspace */
|
| 1596 |
slepc |
154 |
ierr = EPSAllocateSolution(eps);CHKERRQ(ierr);
|
| 1207 |
slepc |
155 |
|
| 2001 |
eromero |
156 |
/* Setup the preconditioner */
|
|
|
157 |
ops->eps = eps;
|
| 1207 |
slepc |
158 |
if (primme->correctionParams.precondition) {
|
| 2331 |
jroman |
159 |
ierr = STGetKSP(eps->OP,&ops->ksp);CHKERRQ(ierr);
|
|
|
160 |
ierr = PetscTypeCompare((PetscObject)ops->ksp,KSPPREONLY,&t);CHKERRQ(ierr);
|
|
|
161 |
if (!t) SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME only works with KSPPREONLY");
|
| 1189 |
slepc |
162 |
primme->preconditioner = PETSC_NULL;
|
| 1187 |
slepc |
163 |
primme->applyPreconditioner = applyPreconditioner_PRIMME;
|
|
|
164 |
}
|
|
|
165 |
|
| 1212 |
slepc |
166 |
/* Prepare auxiliary vectors */
|
| 1928 |
jroman |
167 |
ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,eps->nloc,eps->n,PETSC_NULL,&ops->x);CHKERRQ(ierr);
|
|
|
168 |
ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,eps->nloc,eps->n,PETSC_NULL,&ops->y);CHKERRQ(ierr);
|
| 1189 |
slepc |
169 |
|
| 1947 |
jroman |
170 |
/* dispatch solve method */
|
| 2214 |
jroman |
171 |
if (eps->leftvecs) SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"Left vectors not supported in this solver");
|
| 1947 |
jroman |
172 |
eps->ops->solve = EPSSolve_PRIMME;
|
| 1187 |
slepc |
173 |
PetscFunctionReturn(0);
|
|
|
174 |
}
|
|
|
175 |
|
|
|
176 |
#undef __FUNCT__
|
|
|
177 |
#define __FUNCT__ "EPSSolve_PRIMME"
|
|
|
178 |
PetscErrorCode EPSSolve_PRIMME(EPS eps)
|
|
|
179 |
{
|
|
|
180 |
PetscErrorCode ierr;
|
| 1201 |
slepc |
181 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
|
|
|
182 |
PetscScalar *a;
|
| 2320 |
jroman |
183 |
#if defined(PETSC_USE_COMPLEX)
|
| 1509 |
slepc |
184 |
PetscInt i;
|
| 1201 |
slepc |
185 |
PetscReal *evals;
|
| 1187 |
slepc |
186 |
#endif
|
|
|
187 |
|
|
|
188 |
PetscFunctionBegin;
|
| 1240 |
slepc |
189 |
/* Reset some parameters left from previous runs */
|
|
|
190 |
ops->primme.aNorm = 0.0;
|
| 1933 |
jroman |
191 |
ops->primme.initSize = eps->nini;
|
| 1240 |
slepc |
192 |
ops->primme.iseed[0] = -1;
|
|
|
193 |
|
| 1187 |
slepc |
194 |
/* Call PRIMME solver */
|
| 2331 |
jroman |
195 |
ierr = VecGetArray(eps->V[0],&a);CHKERRQ(ierr);
|
| 2320 |
jroman |
196 |
#if !defined(PETSC_USE_COMPLEX)
|
| 2331 |
jroman |
197 |
ierr = dprimme(eps->eigr,a,eps->errest,&ops->primme);
|
| 1187 |
slepc |
198 |
#else
|
| 1212 |
slepc |
199 |
/* PRIMME returns real eigenvalues, but SLEPc works with complex ones */
|
| 2330 |
jroman |
200 |
ierr = PetscMalloc(eps->ncv*sizeof(PetscReal),&evals);CHKERRQ(ierr);
|
| 2331 |
jroman |
201 |
ierr = zprimme(evals,(Complex_Z*)a,eps->errest,&ops->primme);
|
| 1201 |
slepc |
202 |
for (i=0;i<eps->ncv;i++)
|
|
|
203 |
eps->eigr[i] = evals[i];
|
| 2330 |
jroman |
204 |
ierr = PetscFree(evals);CHKERRQ(ierr);
|
| 1187 |
slepc |
205 |
#endif
|
| 2331 |
jroman |
206 |
ierr = VecRestoreArray(eps->V[0],&a);CHKERRQ(ierr);
|
| 1187 |
slepc |
207 |
|
|
|
208 |
switch(ierr) {
|
|
|
209 |
case 0: /* Successful */
|
|
|
210 |
break;
|
|
|
211 |
|
|
|
212 |
case -1:
|
| 2214 |
jroman |
213 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME: Failed to open output file");
|
| 1187 |
slepc |
214 |
break;
|
|
|
215 |
|
|
|
216 |
case -2:
|
| 2214 |
jroman |
217 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME: Insufficient integer or real workspace allocated");
|
| 1187 |
slepc |
218 |
break;
|
|
|
219 |
|
|
|
220 |
case -3:
|
| 2214 |
jroman |
221 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME: main_iter encountered a problem");
|
| 1187 |
slepc |
222 |
break;
|
|
|
223 |
|
|
|
224 |
default:
|
| 2214 |
jroman |
225 |
SETERRQ(((PetscObject)eps)->comm,PETSC_ERR_SUP,"PRIMME: some parameters wrong configured");
|
| 1187 |
slepc |
226 |
break;
|
|
|
227 |
}
|
|
|
228 |
|
| 1240 |
slepc |
229 |
eps->nconv = ops->primme.initSize >= 0 ? ops->primme.initSize : 0;
|
|
|
230 |
eps->reason = eps->ncv >= eps->nev ? EPS_CONVERGED_TOL : EPS_DIVERGED_ITS;
|
| 1236 |
slepc |
231 |
eps->its = ops->primme.stats.numOuterIterations;
|
|
|
232 |
eps->OP->applys = ops->primme.stats.numMatvecs;
|
| 1187 |
slepc |
233 |
PetscFunctionReturn(0);
|
|
|
234 |
}
|
|
|
235 |
|
| 1201 |
slepc |
236 |
#undef __FUNCT__
|
|
|
237 |
#define __FUNCT__ "multMatvec_PRIMME"
|
| 2331 |
jroman |
238 |
static void multMatvec_PRIMME(void *in,void *out,int *blockSize,primme_params *primme)
|
| 1187 |
slepc |
239 |
{
|
| 1212 |
slepc |
240 |
PetscErrorCode ierr;
|
| 2331 |
jroman |
241 |
PetscInt i,N = primme->n;
|
| 1212 |
slepc |
242 |
EPS_PRIMME *ops = (EPS_PRIMME *)primme->matrix;
|
| 2331 |
jroman |
243 |
Vec x = ops->x,y = ops->y;
|
| 1212 |
slepc |
244 |
Mat A = ops->A;
|
| 1187 |
slepc |
245 |
|
| 1201 |
slepc |
246 |
PetscFunctionBegin;
|
| 1187 |
slepc |
247 |
for (i=0;i<*blockSize;i++) {
|
|
|
248 |
/* build vectors using 'in' an 'out' workspace */
|
| 2331 |
jroman |
249 |
ierr = VecPlaceArray(x,(PetscScalar*)in+N*i);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
250 |
ierr = VecPlaceArray(y,(PetscScalar*)out+N*i);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
251 |
|
| 2331 |
jroman |
252 |
ierr = MatMult(A,x,y);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
253 |
|
| 2331 |
jroman |
254 |
ierr = VecResetArray(x);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
255 |
ierr = VecResetArray(y);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
256 |
}
|
| 1201 |
slepc |
257 |
PetscFunctionReturnVoid();
|
| 1187 |
slepc |
258 |
}
|
|
|
259 |
|
| 1201 |
slepc |
260 |
#undef __FUNCT__
|
|
|
261 |
#define __FUNCT__ "applyPreconditioner_PRIMME"
|
| 2331 |
jroman |
262 |
static void applyPreconditioner_PRIMME(void *in,void *out,int *blockSize,struct primme_params *primme)
|
| 1187 |
slepc |
263 |
{
|
| 1212 |
slepc |
264 |
PetscErrorCode ierr;
|
| 2331 |
jroman |
265 |
PetscInt i,N = primme->n,lits;
|
| 1212 |
slepc |
266 |
EPS_PRIMME *ops = (EPS_PRIMME *)primme->matrix;
|
| 2331 |
jroman |
267 |
Vec x = ops->x,y = ops->y;
|
| 1189 |
slepc |
268 |
|
| 1201 |
slepc |
269 |
PetscFunctionBegin;
|
| 1187 |
slepc |
270 |
for (i=0;i<*blockSize;i++) {
|
|
|
271 |
/* build vectors using 'in' an 'out' workspace */
|
| 2331 |
jroman |
272 |
ierr = VecPlaceArray(x,(PetscScalar*)in+N*i);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
273 |
ierr = VecPlaceArray(y,(PetscScalar*)out+N*i);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
274 |
|
| 2331 |
jroman |
275 |
ierr = KSPSolve(ops->ksp,x,y);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
276 |
ierr = KSPGetIterationNumber(ops->ksp,&lits);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 2001 |
eromero |
277 |
ops->eps->OP->lineariterations+= lits;
|
| 1187 |
slepc |
278 |
|
| 2331 |
jroman |
279 |
ierr = VecResetArray(x);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
|
|
280 |
ierr = VecResetArray(y);CHKERRABORT(PETSC_COMM_WORLD,ierr);
|
| 1187 |
slepc |
281 |
}
|
| 1201 |
slepc |
282 |
PetscFunctionReturnVoid();
|
| 1187 |
slepc |
283 |
}
|
|
|
284 |
|
|
|
285 |
#undef __FUNCT__
|
| 2348 |
jroman |
286 |
#define __FUNCT__ "EPSReset_PRIMME"
|
| 2395 |
jroman |
287 |
PetscErrorCode EPSReset_PRIMME(EPS eps)
|
| 1187 |
slepc |
288 |
{
|
|
|
289 |
PetscErrorCode ierr;
|
| 2317 |
jroman |
290 |
EPS_PRIMME *ops = (EPS_PRIMME *)eps->data;
|
| 1187 |
slepc |
291 |
|
|
|
292 |
PetscFunctionBegin;
|
|
|
293 |
primme_Free(&ops->primme);
|
| 2305 |
jroman |
294 |
ierr = VecDestroy(&ops->x);CHKERRQ(ierr);
|
|
|
295 |
ierr = VecDestroy(&ops->y);CHKERRQ(ierr);
|
| 2348 |
jroman |
296 |
ierr = EPSFreeSolution(eps);CHKERRQ(ierr);
|
|
|
297 |
PetscFunctionReturn(0);
|
|
|
298 |
}
|
|
|
299 |
|
|
|
300 |
#undef __FUNCT__
|
|
|
301 |
#define __FUNCT__ "EPSDestroy_PRIMME"
|
|
|
302 |
PetscErrorCode EPSDestroy_PRIMME(EPS eps)
|
|
|
303 |
{
|
|
|
304 |
PetscErrorCode ierr;
|
|
|
305 |
|
|
|
306 |
PetscFunctionBegin;
|
| 1218 |
slepc |
307 |
ierr = PetscFree(eps->data);CHKERRQ(ierr);
|
| 1925 |
jroman |
308 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetBlockSize_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
309 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetMethod_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
310 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetBlockSize_C","",PETSC_NULL);CHKERRQ(ierr);
|
|
|
311 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetMethod_C","",PETSC_NULL);CHKERRQ(ierr);
|
| 1187 |
slepc |
312 |
PetscFunctionReturn(0);
|
|
|
313 |
}
|
|
|
314 |
|
|
|
315 |
#undef __FUNCT__
|
|
|
316 |
#define __FUNCT__ "EPSView_PRIMME"
|
|
|
317 |
PetscErrorCode EPSView_PRIMME(EPS eps,PetscViewer viewer)
|
|
|
318 |
{
|
| 2216 |
jroman |
319 |
PetscErrorCode ierr;
|
|
|
320 |
PetscBool isascii;
|
|
|
321 |
primme_params *primme = &((EPS_PRIMME *)eps->data)->primme;
|
| 1239 |
slepc |
322 |
EPSPRIMMEMethod methodn;
|
| 2482 |
jroman |
323 |
PetscMPIInt rank;
|
| 1239 |
slepc |
324 |
|
| 1187 |
slepc |
325 |
PetscFunctionBegin;
|
| 2215 |
jroman |
326 |
ierr = PetscTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr);
|
| 1189 |
slepc |
327 |
if (!isascii) {
|
| 2214 |
jroman |
328 |
SETERRQ1(((PetscObject)eps)->comm,1,"Viewer type %s not supported for EPSPRIMME",((PetscObject)viewer)->type_name);
|
| 1189 |
slepc |
329 |
}
|
|
|
330 |
|
| 2365 |
jroman |
331 |
ierr = PetscViewerASCIIPrintf(viewer," PRIMME: block size=%d\n",primme->maxBlockSize);CHKERRQ(ierr);
|
| 2322 |
jroman |
332 |
ierr = EPSPRIMMEGetMethod(eps,&methodn);CHKERRQ(ierr);
|
| 2365 |
jroman |
333 |
ierr = PetscViewerASCIIPrintf(viewer," PRIMME: solver method: %s\n",EPSPRIMMEMethods[methodn]);CHKERRQ(ierr);
|
| 1189 |
slepc |
334 |
|
| 1700 |
eromero |
335 |
/* Display PRIMME params */
|
| 2482 |
jroman |
336 |
ierr = MPI_Comm_rank(((PetscObject)eps)->comm,&rank);CHKERRQ(ierr);
|
|
|
337 |
if (!rank) primme_display_params(*primme);
|
| 1187 |
slepc |
338 |
PetscFunctionReturn(0);
|
|
|
339 |
}
|
|
|
340 |
|
|
|
341 |
#undef __FUNCT__
|
|
|
342 |
#define __FUNCT__ "EPSSetFromOptions_PRIMME"
|
|
|
343 |
PetscErrorCode EPSSetFromOptions_PRIMME(EPS eps)
|
|
|
344 |
{
|
| 2322 |
jroman |
345 |
PetscErrorCode ierr;
|
|
|
346 |
EPS_PRIMME *ctx = (EPS_PRIMME *)eps->data;
|
|
|
347 |
PetscInt bs;
|
|
|
348 |
EPSPRIMMEMethod meth;
|
|
|
349 |
PetscBool flg;
|
| 1187 |
slepc |
350 |
|
|
|
351 |
PetscFunctionBegin;
|
| 2384 |
jroman |
352 |
ierr = PetscOptionsHead("EPS PRIMME Options");CHKERRQ(ierr);
|
| 2322 |
jroman |
353 |
ierr = PetscOptionsInt("-eps_primme_block_size","Maximum block size","EPSPRIMMESetBlockSize",ctx->primme.maxBlockSize,&bs,&flg);CHKERRQ(ierr);
|
|
|
354 |
if (flg) { ierr = EPSPRIMMESetBlockSize(eps,bs);CHKERRQ(ierr); }
|
| 2330 |
jroman |
355 |
ierr = PetscOptionsEnum("-eps_primme_method","Method for solving the eigenproblem","EPSPRIMMESetMethod",EPSPRIMMEMethods,(PetscEnum)ctx->method,(PetscEnum*)&meth,&flg);CHKERRQ(ierr);
|
| 2322 |
jroman |
356 |
if (flg) { ierr = EPSPRIMMESetMethod(eps,meth);CHKERRQ(ierr); }
|
| 2384 |
jroman |
357 |
ierr = PetscOptionsTail();CHKERRQ(ierr);
|
| 1187 |
slepc |
358 |
PetscFunctionReturn(0);
|
|
|
359 |
}
|
|
|
360 |
|
|
|
361 |
EXTERN_C_BEGIN
|
|
|
362 |
#undef __FUNCT__
|
|
|
363 |
#define __FUNCT__ "EPSPRIMMESetBlockSize_PRIMME"
|
| 1509 |
slepc |
364 |
PetscErrorCode EPSPRIMMESetBlockSize_PRIMME(EPS eps,PetscInt bs)
|
| 1187 |
slepc |
365 |
{
|
| 2331 |
jroman |
366 |
EPS_PRIMME *ops = (EPS_PRIMME*)eps->data;
|
| 1187 |
slepc |
367 |
|
|
|
368 |
PetscFunctionBegin;
|
|
|
369 |
if (bs == PETSC_DEFAULT) ops->primme.maxBlockSize = 1;
|
|
|
370 |
else if (bs <= 0) {
|
| 2331 |
jroman |
371 |
SETERRQ(((PetscObject)eps)->comm,1,"PRIMME: wrong block size");
|
| 1187 |
slepc |
372 |
} else ops->primme.maxBlockSize = bs;
|
|
|
373 |
PetscFunctionReturn(0);
|
|
|
374 |
}
|
|
|
375 |
EXTERN_C_END
|
|
|
376 |
|
|
|
377 |
#undef __FUNCT__
|
|
|
378 |
#define __FUNCT__ "EPSPRIMMESetBlockSize"
|
| 1201 |
slepc |
379 |
/*@
|
| 2317 |
jroman |
380 |
EPSPRIMMESetBlockSize - The maximum block size the code will try to use.
|
|
|
381 |
The user should set
|
|
|
382 |
this based on the architecture specifics of the target computer,
|
|
|
383 |
as well as any a priori knowledge of multiplicities. The code does
|
|
|
384 |
NOT require BlockSize > 1 to find multiple eigenvalues. For some
|
|
|
385 |
methods, keeping BlockSize = 1 yields the best overall performance.
|
| 1187 |
slepc |
386 |
|
|
|
387 |
Collective on EPS
|
|
|
388 |
|
|
|
389 |
Input Parameters:
|
|
|
390 |
+ eps - the eigenproblem solver context
|
|
|
391 |
- bs - block size
|
|
|
392 |
|
|
|
393 |
Options Database Key:
|
| 1212 |
slepc |
394 |
. -eps_primme_block_size - Sets the max allowed block size value
|
| 1187 |
slepc |
395 |
|
| 1212 |
slepc |
396 |
Notes:
|
|
|
397 |
If the block size is not set, the value established by primme_initialize
|
|
|
398 |
is used.
|
| 1187 |
slepc |
399 |
|
|
|
400 |
Level: advanced
|
|
|
401 |
.seealso: EPSPRIMMEGetBlockSize()
|
|
|
402 |
@*/
|
| 1509 |
slepc |
403 |
PetscErrorCode EPSPRIMMESetBlockSize(EPS eps,PetscInt bs)
|
| 1187 |
slepc |
404 |
{
|
| 2221 |
jroman |
405 |
PetscErrorCode ierr;
|
| 1187 |
slepc |
406 |
|
|
|
407 |
PetscFunctionBegin;
|
| 2213 |
jroman |
408 |
PetscValidHeaderSpecific(eps,EPS_CLASSID,1);
|
| 2326 |
jroman |
409 |
PetscValidLogicalCollectiveInt(eps,bs,2);
|
| 2221 |
jroman |
410 |
ierr = PetscTryMethod(eps,"EPSPRIMMESetBlockSize_C",(EPS,PetscInt),(eps,bs));CHKERRQ(ierr);
|
| 1187 |
slepc |
411 |
PetscFunctionReturn(0);
|
|
|
412 |
}
|
|
|
413 |
|
|
|
414 |
EXTERN_C_BEGIN
|
|
|
415 |
#undef __FUNCT__
|
|
|
416 |
#define __FUNCT__ "EPSPRIMMEGetBlockSize_PRIMME"
|
| 1509 |
slepc |
417 |
PetscErrorCode EPSPRIMMEGetBlockSize_PRIMME(EPS eps,PetscInt *bs)
|
| 1187 |
slepc |
418 |
{
|
| 2331 |
jroman |
419 |
EPS_PRIMME *ops = (EPS_PRIMME*)eps->data;
|
| 1187 |
slepc |
420 |
|
|
|
421 |
PetscFunctionBegin;
|
|
|
422 |
if (bs) *bs = ops->primme.maxBlockSize;
|
|
|
423 |
PetscFunctionReturn(0);
|
|
|
424 |
}
|
|
|
425 |
EXTERN_C_END
|
|
|
426 |
|
|
|
427 |
#undef __FUNCT__
|
|
|
428 |
#define __FUNCT__ "EPSPRIMMEGetBlockSize"
|
| 1201 |
slepc |
429 |
/*@
|
| 2317 |
jroman |
430 |
EPSPRIMMEGetBlockSize - Get the maximum block size the code will try to use.
|
| 1187 |
slepc |
431 |
|
| 2317 |
jroman |
432 |
Collective on EPS
|
|
|
433 |
|
| 1187 |
slepc |
434 |
Input Parameters:
|
| 1206 |
slepc |
435 |
. eps - the eigenproblem solver context
|
| 1187 |
slepc |
436 |
|
|
|
437 |
Output Parameters:
|
| 1206 |
slepc |
438 |
. bs - returned block size
|
| 1187 |
slepc |
439 |
|
|
|
440 |
Level: advanced
|
|
|
441 |
.seealso: EPSPRIMMESetBlockSize()
|
|
|
442 |
@*/
|
| 1509 |
slepc |
443 |
PetscErrorCode EPSPRIMMEGetBlockSize(EPS eps,PetscInt *bs)
|
| 1187 |
slepc |
444 |
{
|
| 2221 |
jroman |
445 |
PetscErrorCode ierr;
|
| 1187 |
slepc |
446 |
|
|
|
447 |
PetscFunctionBegin;
|
| 2213 |
jroman |
448 |
PetscValidHeaderSpecific(eps,EPS_CLASSID,1);
|
| 2221 |
jroman |
449 |
ierr = PetscTryMethod(eps,"EPSPRIMMEGetBlockSize_C",(EPS,PetscInt*),(eps,bs));CHKERRQ(ierr);
|
| 1187 |
slepc |
450 |
PetscFunctionReturn(0);
|
|
|
451 |
}
|
|
|
452 |
|
|
|
453 |
EXTERN_C_BEGIN
|
|
|
454 |
#undef __FUNCT__
|
|
|
455 |
#define __FUNCT__ "EPSPRIMMESetMethod_PRIMME"
|
| 2326 |
jroman |
456 |
PetscErrorCode EPSPRIMMESetMethod_PRIMME(EPS eps,EPSPRIMMEMethod method)
|
| 1187 |
slepc |
457 |
{
|
| 2331 |
jroman |
458 |
EPS_PRIMME *ops = (EPS_PRIMME*)eps->data;
|
| 1187 |
slepc |
459 |
|
|
|
460 |
PetscFunctionBegin;
|
| 1446 |
slepc |
461 |
if (method == PETSC_DEFAULT) ops->method = DEFAULT_MIN_TIME;
|
| 1187 |
slepc |
462 |
else ops->method = (primme_preset_method)method;
|
|
|
463 |
PetscFunctionReturn(0);
|
|
|
464 |
}
|
|
|
465 |
EXTERN_C_END
|
|
|
466 |
|
|
|
467 |
#undef __FUNCT__
|
|
|
468 |
#define __FUNCT__ "EPSPRIMMESetMethod"
|
| 1201 |
slepc |
469 |
/*@
|
| 1187 |
slepc |
470 |
EPSPRIMMESetMethod - Sets the method for the PRIMME library.
|
|
|
471 |
|
|
|
472 |
Collective on EPS
|
|
|
473 |
|
|
|
474 |
Input Parameters:
|
| 1206 |
slepc |
475 |
+ eps - the eigenproblem solver context
|
| 1212 |
slepc |
476 |
- method - method that will be used by PRIMME. It must be one of:
|
| 1940 |
jroman |
477 |
EPS_PRIMME_DYNAMIC, EPS_PRIMME_DEFAULT_MIN_TIME(EPS_PRIMME_JDQMR_ETOL),
|
|
|
478 |
EPS_PRIMME_DEFAULT_MIN_MATVECS(EPS_PRIMME_GD_OLSEN_PLUSK), EPS_PRIMME_ARNOLDI,
|
|
|
479 |
EPS_PRIMME_GD, EPS_PRIMME_GD_PLUSK, EPS_PRIMME_GD_OLSEN_PLUSK,
|
|
|
480 |
EPS_PRIMME_JD_OLSEN_PLUSK, EPS_PRIMME_RQI, EPS_PRIMME_JDQR, EPS_PRIMME_JDQMR,
|
|
|
481 |
EPS_PRIMME_JDQMR_ETOL, EPS_PRIMME_SUBSPACE_ITERATION,
|
|
|
482 |
EPS_PRIMME_LOBPCG_ORTHOBASIS, EPS_PRIMME_LOBPCG_ORTHOBASISW
|
| 1187 |
slepc |
483 |
|
|
|
484 |
Options Database Key:
|
| 1206 |
slepc |
485 |
. -eps_primme_set_method - Sets the method for the PRIMME library.
|
| 1187 |
slepc |
486 |
|
| 1212 |
slepc |
487 |
Note:
|
| 1940 |
jroman |
488 |
If not set, the method defaults to EPS_PRIMME_DEFAULT_MIN_TIME.
|
| 1187 |
slepc |
489 |
|
|
|
490 |
Level: advanced
|
| 1364 |
slepc |
491 |
|
|
|
492 |
.seealso: EPSPRIMMEGetMethod(), EPSPRIMMEMethod
|
| 1187 |
slepc |
493 |
@*/
|
| 2326 |
jroman |
494 |
PetscErrorCode EPSPRIMMESetMethod(EPS eps,EPSPRIMMEMethod method)
|
| 1187 |
slepc |
495 |
{
|
| 2221 |
jroman |
496 |
PetscErrorCode ierr;
|
| 1187 |
slepc |
497 |
|
|
|
498 |
PetscFunctionBegin;
|
| 2213 |
jroman |
499 |
PetscValidHeaderSpecific(eps,EPS_CLASSID,1);
|
| 2326 |
jroman |
500 |
PetscValidLogicalCollectiveEnum(eps,method,2);
|
| 2221 |
jroman |
501 |
ierr = PetscTryMethod(eps,"EPSPRIMMESetMethod_C",(EPS,EPSPRIMMEMethod),(eps,method));CHKERRQ(ierr);
|
| 1187 |
slepc |
502 |
PetscFunctionReturn(0);
|
|
|
503 |
}
|
|
|
504 |
|
|
|
505 |
EXTERN_C_BEGIN
|
|
|
506 |
#undef __FUNCT__
|
|
|
507 |
#define __FUNCT__ "EPSPRIMMEGetMethod_PRIMME"
|
| 2326 |
jroman |
508 |
PetscErrorCode EPSPRIMMEGetMethod_PRIMME(EPS eps,EPSPRIMMEMethod *method)
|
| 1187 |
slepc |
509 |
{
|
| 2331 |
jroman |
510 |
EPS_PRIMME *ops = (EPS_PRIMME*)eps->data;
|
| 1187 |
slepc |
511 |
|
|
|
512 |
PetscFunctionBegin;
|
| 2317 |
jroman |
513 |
if (method) *method = (EPSPRIMMEMethod)ops->method;
|
| 1187 |
slepc |
514 |
PetscFunctionReturn(0);
|
|
|
515 |
}
|
|
|
516 |
EXTERN_C_END
|
|
|
517 |
|
|
|
518 |
#undef __FUNCT__
|
|
|
519 |
#define __FUNCT__ "EPSPRIMMEGetMethod"
|
|
|
520 |
/*@C
|
|
|
521 |
EPSPRIMMEGetMethod - Gets the method for the PRIMME library.
|
|
|
522 |
|
|
|
523 |
Mon Collective on EPS
|
|
|
524 |
|
|
|
525 |
Input Parameters:
|
| 1206 |
slepc |
526 |
. eps - the eigenproblem solver context
|
| 1187 |
slepc |
527 |
|
|
|
528 |
Output Parameters:
|
| 1212 |
slepc |
529 |
. method - method that will be used by PRIMME. It must be one of:
|
| 1940 |
jroman |
530 |
EPS_PRIMME_DYNAMIC, EPS_PRIMME_DEFAULT_MIN_TIME(EPS_PRIMME_JDQMR_ETOL),
|
|
|
531 |
EPS_PRIMME_DEFAULT_MIN_MATVECS(EPS_PRIMME_GD_OLSEN_PLUSK), EPS_PRIMME_ARNOLDI,
|
|
|
532 |
EPS_PRIMME_GD, EPS_PRIMME_GD_PLUSK, EPS_PRIMME_GD_OLSEN_PLUSK,
|
|
|
533 |
EPS_PRIMME_JD_OLSEN_PLUSK, EPS_PRIMME_RQI, EPS_PRIMME_JDQR, EPS_PRIMME_JDQMR,
|
|
|
534 |
EPS_PRIMME_JDQMR_ETOL, EPS_PRIMME_SUBSPACE_ITERATION,
|
|
|
535 |
EPS_PRIMME_LOBPCG_ORTHOBASIS, EPS_PRIMME_LOBPCG_ORTHOBASISW
|
| 1187 |
slepc |
536 |
|
|
|
537 |
Level: advanced
|
| 1364 |
slepc |
538 |
|
|
|
539 |
.seealso: EPSPRIMMESetMethod(), EPSPRIMMEMethod
|
| 1187 |
slepc |
540 |
@*/
|
| 1190 |
slepc |
541 |
PetscErrorCode EPSPRIMMEGetMethod(EPS eps, EPSPRIMMEMethod *method)
|
| 1187 |
slepc |
542 |
{
|
| 2221 |
jroman |
543 |
PetscErrorCode ierr;
|
| 1187 |
slepc |
544 |
|
|
|
545 |
PetscFunctionBegin;
|
| 2213 |
jroman |
546 |
PetscValidHeaderSpecific(eps,EPS_CLASSID,1);
|
| 2221 |
jroman |
547 |
ierr = PetscTryMethod(eps,"EPSPRIMMEGetMethod_C",(EPS,EPSPRIMMEMethod*),(eps,method));CHKERRQ(ierr);
|
| 1187 |
slepc |
548 |
PetscFunctionReturn(0);
|
|
|
549 |
}
|
|
|
550 |
|
|
|
551 |
EXTERN_C_BEGIN
|
|
|
552 |
#undef __FUNCT__
|
|
|
553 |
#define __FUNCT__ "EPSCreate_PRIMME"
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|
|
554 |
PetscErrorCode EPSCreate_PRIMME(EPS eps)
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|
|
555 |
{
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|
|
556 |
PetscErrorCode ierr;
|
|
|
557 |
EPS_PRIMME *primme;
|
|
|
558 |
|
|
|
559 |
PetscFunctionBegin;
|
| 2331 |
jroman |
560 |
ierr = STSetType(eps->OP,STPRECOND);CHKERRQ(ierr);
|
|
|
561 |
ierr = STPrecondSetKSPHasMat(eps->OP,PETSC_TRUE);CHKERRQ(ierr);
|
| 2001 |
eromero |
562 |
|
| 2329 |
jroman |
563 |
ierr = PetscNewLog(eps,EPS_PRIMME,&primme);CHKERRQ(ierr);
|
| 2331 |
jroman |
564 |
eps->data = (void*)primme;
|
| 1187 |
slepc |
565 |
eps->ops->setup = EPSSetUp_PRIMME;
|
|
|
566 |
eps->ops->setfromoptions = EPSSetFromOptions_PRIMME;
|
|
|
567 |
eps->ops->destroy = EPSDestroy_PRIMME;
|
| 2348 |
jroman |
568 |
eps->ops->reset = EPSReset_PRIMME;
|
| 1187 |
slepc |
569 |
eps->ops->view = EPSView_PRIMME;
|
|
|
570 |
eps->ops->backtransform = EPSBackTransform_Default;
|
|
|
571 |
eps->ops->computevectors = EPSComputeVectors_Default;
|
|
|
572 |
|
|
|
573 |
primme_initialize(&primme->primme);
|
|
|
574 |
primme->primme.matrixMatvec = multMatvec_PRIMME;
|
| 1239 |
slepc |
575 |
primme->primme.globalSumDouble = par_GlobalSumDouble;
|
| 1940 |
jroman |
576 |
primme->method = (primme_preset_method)EPS_PRIMME_DEFAULT_MIN_TIME;
|
| 1942 |
jroman |
577 |
|
| 1187 |
slepc |
578 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetBlockSize_C","EPSPRIMMESetBlockSize_PRIMME",EPSPRIMMESetBlockSize_PRIMME);CHKERRQ(ierr);
|
|
|
579 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMESetMethod_C","EPSPRIMMESetMethod_PRIMME",EPSPRIMMESetMethod_PRIMME);CHKERRQ(ierr);
|
|
|
580 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetBlockSize_C","EPSPRIMMEGetBlockSize_PRIMME",EPSPRIMMEGetBlockSize_PRIMME);CHKERRQ(ierr);
|
|
|
581 |
ierr = PetscObjectComposeFunctionDynamic((PetscObject)eps,"EPSPRIMMEGetMethod_C","EPSPRIMMEGetMethod_PRIMME",EPSPRIMMEGetMethod_PRIMME);CHKERRQ(ierr);
|
|
|
582 |
PetscFunctionReturn(0);
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|
|
583 |
}
|
|
|
584 |
EXTERN_C_END
|